Job Description A0AVT1 Confidence 100.00% Date Tue Apr 3 14:58:27 BST 2012 Rank 8 Aligned Residues 301 % Identity 29% Template c1y8qA_ PDB info PDB header:ligase Chain: A: PDB Molecule:ubiquitin-like 1 activating enzyme e1a; PDBTitle: sumo e1 activating enzyme sae1-sae2-mg-atp complex Resolution 2.25 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	I	D	D	A	L	Y	S	R	Q	R	Y	V	L	G	D	T	A	M	Q	K	M	A	K	S	H	V	F	L	S	G	M	G	G	L	G	L	E	I	A	K	N	L	V	L	A	G	I	K	A	V	T	I	H	D	T	E	K	C	Q	A	W	D	L	G	T	N	F	F	L	S	E	D	D	V	V	N	K	R
Query Conservation
Alig confidence																																																																														.	.
Template Conservation																																																																														.	.
Template Sequence		S	E	E	E	A	A	Q	Y	D	R	Q	I	R	L	W	G	L	E	A	Q	K	R	L	R	A	S	R	V	L	L	V	G	L	K	G	L	G	A	E	I	A	K	N	L	I	L	A	G	V	K	G	L	T	M	L	D	H	E	Q	V	T	P	E	D	P	G	A	Q	F	L	I	R	T	G	S	V	.	.	G	R
Template Known Secondary structure																										T									S														T		S									B			S	S		G	G	G		T	T	S		S	S		T	.	.	T	S
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	A	E	A	V	L	K	H	I	A	E	L	N	P	Y	V	H	V	T	S	S	S	V	P	F	N	E	T	T	D	L	S	F	L	D	K	Y	Q	C	V	V	L	T	E	M	K	L	P	L	Q	K	K	I	N	D	F	C	R	S	Q	C	P	P	I	K	F	I	S	A	D	V	H	G	I	W	S	R	L	F
Query Conservation
Alig confidence																														.																																	.	.
Template Conservation																														.																																	.	.
Template Sequence		N	R	A	E	A	S	L	E	R	A	Q	N	L	N	P	M	V	D	V	K	V	D	T	E	D	I	E	K	.	K	P	E	S	F	F	T	Q	F	D	A	V	C	L	T	C	C	S	R	D	V	I	V	K	V	D	Q	I	C	H	K	N	.	.	S	I	K	F	F	T	G	D	V	F	G	Y	H	G	Y	T	F
Template Known Secondary structure		B												T		T	T	S							S		G	G	G	.							T	T		S						S																T	.	.	T										B	T
Template Predicted Secondary structure																														.																																	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	D	F	G	D	E	F	E	V	L	D	T	T	G	E	E	P	K	E	I	F	I	S	N	I	T	Q	A	N	P	G	I	V	T	C	L	E	N	H	P	H	K	L	E	T	G	Q	F	L	T	F	R	E	I	N	G	M	T	G	L	N	G	S	I	Q	Q	I	T	V	I	S	P	F	S	F	S	I	G	D	T
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	N	L	G	E	H	E	F	V	E	E	K	T	E	T	T	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		T	E	L	E	P	Y	L	H	G	G	I	A	V	Q	V	K	T	P	K	T	V	F	F	E	S	L	E	R	Q	L	K	H	P	K	C	L	I	V	D	F	S	N	P	E	A	P	L	E	I	H	T	A	M	L	A	L	D	Q	F	Q	E	K	Y	S	R	K	P	N	V	G	C	.	Q	Q	D	S	E	E	L	L
Query Conservation																																																																									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	K	K	V	V	F	C	P	V	K	E	A	L	E	V	D	W	S	S	E	K	A	K	A	A	L	K	R	T	T	S	D	Y	F	L	L	Q	V	L	L	K	F	R	T	D	K	G	R	D	P	S	S	D	T	Y	E	E	D	S	E	L	L	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	S			S		S								T	T	S		T															S	S	S				G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	A	T	S	I	S	E	T	L	E	E	K	P	D	V	N	A	D	I	V	H	W	L	S	W	T	A	Q	G	F	L	S	P	L	A	A	A	V	G	G	V	A	S	Q	E	V	L	K	A	V	T	G	K	F	S	P	L	C	Q	W	L	Y	L	E	A	A	D	I
Query Conservation
Alig confidence														.	.	.
Template Conservation														.	.	.
Template Sequence		Q	I	R	N	D	V	L	D	S	L	G	I	.	.	.	S	P	D	L	L	P	E	D	F	V	R	Y	C	F	S	E	M	A	P	V	C	A	V	V	G	G	I	L	A	Q	E	I	V	K	A	L	S	Q	R	D	P	P	H	N	N	F	F	F	F	D	G	M	K	G
Template Known Secondary structure										T	T	T		.	.	.		G	G	G	S		G	G	G	G	G	S	S		S	B																						T	B	S					S						T	T	T	T
Template Predicted Secondary structure														.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.				.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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