 |
| Job Description | A0AVT1 | | Confidence | 88.30% | Date | Tue Apr 3 14:58:27 BST 2012 |
| Rank | 237 | Aligned Residues | 35 |
| % Identity | 17% | Template | c1y6jA_ |
| PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:l-lactate dehydrogenase; |
PDBTitle: l-lactate dehydrogenase from clostridium thermocellum cth-1135
|
| Resolution | 3.01 Å |
|
|   |   |
460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
N | L | N | I | F | L | V | G | C | G | A | I | G | C | E | M | L | K | N | F | A | L | L | G | V | G | T | S | K | E | K | G | M | I | T | V | T | D | P | D |
| Query Conservation |   |
  |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|
|   |
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   | . | . | . | . | . |   |
|
|   |
|   |
|   |   |
| Template Sequence |   |
R | S | K | V | A | I | I | G | A | G | F | V | G | A | S | A | A | F | T | M | A | L | R | Q | T | A | . |
. |
. |
. |
. |
N | E | L | V | L | I | D | V | F |
| Template Known Secondary structure |   |
|
|
|  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | . | . | . | . | . | S |  |  |  |  |  |
|
|
|
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . |
|  |  |  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 40 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|