 |
| Job Description | A0AVT1 | | Confidence | 95.83% | Date | Tue Apr 3 14:58:27 BST 2012 |
| Rank | 30 | Aligned Residues | 81 |
| % Identity | 16% | Template | c1xdwA_ |
| PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:nad+-dependent (r)-2-hydroxyglutarate |
PDBTitle: nad+-dependent (r)-2-hydroxyglutarate dehydrogenase from2 acidaminococcus fermentans
|
| Resolution | 1.98 Å |
|
 |
|   |   |
458 | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | Q | N | L | N | I | F | L | V | G | C | G | A | I | G | C | E | M | L | K | N | F | A | L | L | G | V | G | T | S | K | E | K | G | M | I | T | V | T | D | P | D | L | I | E | K | S | N | L | N | R | Q | F | L | F | R | P | H | H | I | Q | K | P | K | S | Y | T | A | A | D | A | T | L | K | I | N | S | Q | I | K |
| Query Conservation |   |
|   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |
|
|   |
|
|   |   |   |   |   |   |   |
|
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |   |
|
|
| . | . | . | . | . | . | . |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|
|   |   |
|
|
| Template Sequence |   |
V | R | N | C | T | V | G | V | V | G | L | G | R | I | G | R | V | A | A | Q | I | F | H | G | M | G | A | . |
. |
. |
. |
. |
. |
. |
T | V | I | G | E | D | V | F | E | I | K | G | I | E | D | Y | C | T | Q | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | L | D | E | V | L | E | K | S | D |
| Template Known Secondary structure |   |
G | G | G | S |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . | . | . | . | . | . | . |  |  |  |  |  |
| S | S |
|
|
| S |
| T | T | T |
|  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |
| S |
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
144 | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 200 |
|   |
|   |   |
538 | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . |
| Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
I | D | A | H | L | N | K | V | C | P | T | T | E | T | I | Y | N | D | E | F | Y | T | K | Q |
| Query Conservation |   |
|   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |   |   |
|
|
|
|   |   |
|   |   |
|
|   |   |   |   |
|   |   |
|
| Template Sequence |   |
I | I | T | I | H | A | P | Y | I | K | E | N | G | A | V | V | T | R | D | F | L | K | K | M |
| Template Known Secondary structure |   |
 |  |  |  |
|
|
|
|
| T | T | T |
|
| S | B |
|  |  |  |  |  | T | S |
| Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
201 | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|