Job Description A0AVT1 Confidence 83.53% Date Tue Apr 3 14:58:27 BST 2012 Rank 345 Aligned Residues 119 % Identity 18% Template c1oi7A_ PDB info PDB header:synthetase Chain: A: PDB Molecule:succinyl-coa synthetase alpha chain; PDBTitle: the crystal structure of succinyl-coa synthetase alpha2 subunit from thermus thermophilus Resolution 1.23 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		59	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		M	A	K	S	H	V	F	L	S	G	M	G	G	.	L	G	L	E	I	A	K	N	L	V	L	A	G	I	K	A	V	T	I	H	D	T	E	K	C	Q	A	W	D	L	G	T	N	F	F	L	S	E	D	D	V	V	N	K	R	N	R	A	E	A	V	L	K	H	I	A	E	L	N	P	Y	V	H	V	T	S
Query Conservation															.
Alig confidence															.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	R	E	T	R	V	L	V	Q	G	I	T	G	R	E	G	Q	F	H	T	K	Q	M	L	T	Y	G	T	K	I	V	A	G	V	T	P	G	K	G	G	M	E	V	L	G	V	P	V	Y	D	T	V	K	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	H	H	E	V	D	A	S	I	I	F
Template Known Secondary structure			T	T							T	T	T	S														T									T	T		T	T				T	T					S	S					.	.	.	.	.	.	.	.	.	.	.	.	.				S			S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.														60	.	.	.	.	.	.	.	.	.	70	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																			.	.								.
Query SS confidence																			.	.								.
Query Sequence		S	S	V	P	F	N	E	T	T	D	L	S	F	L	D	K	Y	.	.	Q	C	V	V	L	T	E	.	M	K	L	P	L	Q	K	K	I	N	D	F	C	R	S	Q	C	P	P	I	K	F	I	S	A	D	V	H	G	I	W
Query Conservation																			.	.								.
Alig confidence																			.	.								.																	.	.
Template Conservation																																													.	.
Template Sequence		V	P	A	P	A	A	A	D	A	A	L	E	A	A	H	A	G	I	P	L	I	V	L	I	T	E	G	I	P	T	L	D	M	V	R	A	V	E	E	I	K	A	L	.	.	G	S	R	L	I	G	G	N	C	P	G	I	I
Template Known Secondary structure																	T	T		S							S																		.	.	T						S	S	S
Template Predicted Secondary structure																																													.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions