Job Description A0AVT1 Confidence 87.51% Date Tue Apr 3 14:58:27 BST 2012 Rank 256 Aligned Residues 71 % Identity 23% Template c1a5zA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: lactate dehydrogenase from thermotoga maritima (tmldh) Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140
Predicted Secondary structure																									.																																															.
Query SS confidence																									.																																															.
Query Sequence		H	V	F	L	S	G	M	G	G	L	G	L	E	I	A	K	N	L	V	L	A	G	I	.	K	A	V	T	I	H	D	T	E	K	C	Q	A	W	D	L	G	T	N	F	F	L	S	E	D	D	V	V	N	K	R	N	R	A	E	A	V	L	K	H	I	A	E	L	N	P	.	Y	V	H	V	T	S	S	S	V
Query Conservation																									.																																															.
Alig confidence																									.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	G	I	V	G	L	G	R	V	G	S	S	T	A	F	A	L	L	M	K	G	F	A	R	E	M	V	L	I	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	K	R	A	E	G	D	A	L	D	L	I	H	G	T	P	F	T	R	R	A	N	I	Y	A	G
Template Known Secondary structure									S														T			S							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S															G	G	G	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	N	E	T	T	D	L	S	F	L	D	K	Y	Q	C	V	V	L	T
Query Conservation
Alig confidence						.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.
Template Sequence		D	Y	A	D	.	.	.	.	.	.	L	K	G	S	D	V	V	I	V	A
Template Known Secondary structure			G	G	G	.	.	.	.	.	.	G	T	T		S
Template Predicted Secondary structure						.	.	.	.	.	.
Template SS confidence
		84	.	.	.							.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions