Return to main results Retrieve Phyre Job Id

Job DescriptionQ9NUG6
Confidence11.19%DateTue Apr 3 15:15:57 BST 2012
Rank20Aligned Residues52
% Identity15%Templatec2ko2A_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:reticulon-4; PDBTitle: nogo66
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70.........80.........90...
Predicted Secondary structure 







Query SS confidence 





















































Query Sequence  NREGLRALQKDLSLSEDVMVCFGNMFIKMPHPETKEMIEKDQDHLDKEIEKLRK
Query Conservation 





 
 
      
 

  
  


 
     






  

 

  


Alig confidence 









..









































Template Conservation 
  



  
..
   



 


 

 

 
            

     


Template Sequence  YKGVIQAIQK. . SDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRR
Template Known Secondary structure  T
..TTTT

STT

TTT
Template Predicted Secondary structure  ..









Template SS confidence 





















































   16...20..... ....30.........40.........50.........60.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions