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Job Description | Q9NUG6 | Confidence | 9.87% | Date | Tue Apr 3 15:15:57 BST 2012 |
Rank | 24 | Aligned Residues | 33 |
% Identity | 30% | Template | c1y4mC_ |
PDB info |
PDB header:membrane protein | Chain: C: PDB Molecule:herv-frd_6p24.1 provirus ancestral env polyprotein; |
PDBTitle: crystal structure of human endogenous retrovirus herv-frd envelope2 protein (syncitin-2)
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Resolution | 1.60 Å |
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15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | I | D | T | M | A | K | A | L | T | T | M | Q | E | Q | I | D | S | L | A | A | V | V | L | Q | N | R | R | G | L | D | M | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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