Job Description Q96KQ4 Confidence 98.55% Date Wed Jun 6 09:44:33 BST 2012 Rank 261 Aligned Residues 93 % Identity 18% Template c3jxiA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:vanilloid receptor-related osmotically activated channel PDBTitle: crystal structure of the chicken trpv4 ankyrin repeat domain Resolution 2.30 Å

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		883	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.				.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.																	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.
Predicted Secondary structure																															.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	R	F	N	P	L	A	L	L	L	D	A	S	L	E	G	E	F	D	L	V	Q	R	I	I	Y	E	V	.	.	.	E	D	P	S	K	P	N	D	E	G	I	T	P	L	H	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	C	A	G	H	H	H	I	V	K	F	L	L	D	F
Query Conservation																															.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	Y	F	Y	F	G	E	L	P	L	S	L	A	A	C	T	N	Q	P	H	I	V	H	Y	L	T	E	N	G	H	K	Q	A	D	L	R	R	Q	D	S	R	G	N	T	V	L	H	A	L	V	A	I	A	D	N	T	R	E	N	T	K	F	V	T	K	M	Y	D	L	L	L	I	K	C	A	K	L	F	P	D
Template Known Secondary structure			S			S		S	S								T	T												S	S					T	T				T	T	S													S	S																							T	T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		944	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	N	V	N	A	A	D	S	D	G	W	T	P	L	H	C	A	A	S	C	N	S	V	H	L	C	K	Q	L	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	N	L	E	A	L	L	N	N	D	G	L	S	P	L	M	M	A	A	K	T	G	K	I	G	I	F	Q	H	I	I	R
Template Known Secondary structure				G	G	G				T	T	S										T	T
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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