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Job DescriptionQ96KQ4
Confidence98.98%DateWed Jun 6 09:44:33 BST 2012
Rank227Aligned Residues92
% Identity35%Templatec3eu9B_
PDB info PDB header:protein binding, methyl-lysine-binding pChain: B: PDB Molecule:huntingtin-interacting protein 14; PDBTitle: the ankyrin repeat domain of huntingtin interacting protein 14
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   884.....890.........900.........910.........920..
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Query Sequence  VRFNPLALLLDASLEGEFDLVQRIIYEVEDPSKPNDEGI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation 

  
 


  
   
    
  

  




  
  
 
 
  
                                   
Template Sequence  IDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWAT
Template Known Secondary structure 


GGG

TT
TT

TT


TTS

TT
TT

TT

BTTTTB
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   53......60.........70.........80.........90.........100.........110.........120.........130..
 
  
Predicted Secondary structure  ................................................................................
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation                                                                                  
Template Sequence  RQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLT
Template Known Secondary structure  T
TTT

TT


TTS

TT
T

TT


TTS



SSTT
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   133......140.........150.........160.........170.........180.........190.........200.........210..
 
   923......930.........940.........950.........960.........970.....
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Query Sequence  . . . . . . . . . . . . . . TPLHNAVCAGHHHIVKFLLDFGVNVNAADSDGWTPLHCAASCNSVHLCKQLVE
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Template Sequence  FNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQE
Template Known Secondary structure  TT

TT
B
SSS

BTT
TT

SS


TTS

ST

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   213......220.........230.........240.........250.........260.........270.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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