Return to main results Retrieve Phyre Job Id

Job DescriptionQ96KQ4
Confidence99.41%DateWed Jun 6 09:44:33 BST 2012
Rank90Aligned Residues63
% Identity30%Templatec2csiA_
PDB info PDB header:endocytosis/exocytosisChain: A: PDB Molecule:rim binding protein 2; PDBTitle: solution structure of the third sh3 domain of human rim-2 binding protein 2
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1016...1020.........1030...... ...1040.........1050.........1060. ........1070.........1080.
Predicted Secondary structure 














.......
















.








Query SS confidence 




















. . . . . . .
























.



















Query Sequence  LGVMNKGVAYALWDYEAQNSD. . . . . . . ELSFHEGDALTILRRKDESETEWWW. ARLGDREGYVPKNLLGLYPR
Query Conservation            
   
 
   
.......

 
  

 
 
    
     

 .       
  
 
       
Alig confidence 




















.......
















...




.



















Template Conservation 
         

 

             



  

 
 
     ...  

      
  
 

  


    
Template Sequence  SSGSSGRRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEID. . . EDGFYYGELNGQKGLVPSNFLEEVSG
Template Known Secondary structure 




S
SS


TTTTS
SSSTTTS



TT
SS

...SSSTTGGG

B


Template Predicted Secondary structure 





























...








Template SS confidence 









































































   2.......10.........20.........30.........40...... ...50.........60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions