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Job DescriptionQ96KQ4
Confidence96.37%DateWed Jun 6 09:44:33 BST 2012
Rank295Aligned Residues183
% Identity13%Templatec2zv4O_
PDB info PDB header:structural proteinChain: O: PDB Molecule:major vault protein; PDBTitle: the structure of rat liver vault at 3.5 angstrom resolution
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160.........170.........180.........190.........200.........210..
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Query Sequence  DMAARQQQQIENQQQMLVAKEQRLHFLKQQERRQQQSISENEKLQKLKERVEAQENKLKKIRAMRGQVDYSKIMNGNLSA
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Template Sequence  QRTRDALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARGRLER. . QKILDQSEAEKARKELLELEAMSMAVESTGNAKAE
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   648.650.........660.........670.........680.........690 .........700.........710.........720.....
 
   213......220.........230.........240.........250.........260.........270.........280......... 290.
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Query Sequence  EIERFSAMFQEKKQEVQTAILRVDQLSQQLEDLKKGKLNGFQSYNGKLTGPAAVELKRLYQELQIRNQLNQEQNSKL. QQ
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Template Sequence  AESRAEAARIEGEGSVLQAKLKAQALAIETEAELERVKKVREMELIYARAQLELEVSKAQQLANVEAKKFKEMTEALGPG
Template Known Secondary structure  TTTTTTS
TT
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   726...730.........740.........750.........760.........770.........780.........790.........800.....
 
   292.......300.........310.......
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Query Sequence  QKELLNKRNMEVAMMDKRISELRERL
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Template Sequence  TIRDLAVAGPEMQVKLLQSLGLKSTL
Template Known Secondary structure  T


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   806...810.........820.........830.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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