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Job DescriptionQ96KQ4
Confidence33.25%DateWed Jun 6 09:44:33 BST 2012
Rank412Aligned Residues226
% Identity11%Templatec1quuA_
PDB info PDB header:contractile proteinChain: A: PDB Molecule:human skeletal muscle alpha-actinin 2; PDBTitle: crystal structure of two central spectrin-like repeats from2 alpha-actinin
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90.........100.........110.........120.........130.........140.........150
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Query Sequence  PRREEVKFFLRHEDSPTENSEQGGRQTQEQRTQRNVINVPGEKRTENGVGNPRVELTLSELQDMAARQQQQIENQQQMLV
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Template Sequence  RRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDY
Template Known Secondary structure  TTT



SS

TT
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   151........160.........170... ......180.........190.........200.........210... ...
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Query Sequence  AKEQRLHFLKQQERRQQQSISEN. . EKLQKLKERVEAQENKLKKIRAMRGQVDYSKIMNGNLSAE. . . . . . . . . . . . IER
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Template Conservation              
      
          
                           
   
                 
Template Sequence  HDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQS
Template Known Secondary structure  TTTTTT





STTT
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   217..220.........230.........240.........250.........260.........270.........280.........290......
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Query Sequence  FSAMFQEKKQEVQTAILRVDQLSQQLEDLKKGKLNGFQSYNGKLTGPAAVELKRLYQELQIRNQLNQEQNSKLQQQKELL
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Template Sequence  LITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTV. TMDELRTKWDKVKQLVPIRDQSLQEELARQ
Template Known Secondary structure  TS
TTS

S
TT
SS.
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   167..170.........180.........190.........200.........210..... ....220.........230.........240.....
 
   297
Predicted Secondary structure 
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Query Sequence  N
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Template Conservation   
Template Sequence  H
Template Known Secondary structure  S
Template Predicted Secondary structure 
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   246
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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