Return to main results Retrieve Phyre Job Id

Job DescriptionQ96KQ4
Confidence63.12%DateWed Jun 6 09:44:33 BST 2012
Rank348Aligned Residues103
% Identity14%Templatec2pmsD_
PDB info PDB header:metal transport, hydrolaseChain: D: PDB Molecule:pneumococcal surface protein a (pspa); PDBTitle: crystal structure of the complex of human lactoferrin n-lobe and2 lactoferrin-binding domain of pneumococcal surface protein a
Resolution2.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160. ........170.........180.........190.........200......
Predicted Secondary structure  ..
Query SS confidence 
































. .












































Query Sequence  SELQDMAARQQQQIENQQQMLVAKEQRLHFLKQ. . QERRQQQSISENEKLQKLKERVEAQENKLKKIRAMRGQVDYSKIM
Query Conservation   
  
     
         
         
  ..            
            
                   
Alig confidence 
































..












































Template Conservation    
  
   
 


 


    


           
 
           

 
  
 


 
   

      


   
Template Sequence  SHMDAEEVAPQAKIAELENQVHRLEQELKEIDEAPLQSKLDAKKAKLSKLEELSDKIDELDAEIAKLEDQLKAAEEEDYF
Template Known Secondary structure 


STT







Template Predicted Secondary structure 
Template SS confidence 















































































   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   207..210.........220.........230.
Predicted Secondary structure 
Query SS confidence 
























Query Sequence  NGNLSAEIERFSAMFQEKKQEVQTA
Query Conservation        
 
                
Alig confidence 
























Template Conservation        

     

   
 

 
 
Template Sequence  KEGLEKTIAAKKAELEKTEADLKKA
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
























   261........270.........280.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions