 |
Job Description | Q96KQ4 | Confidence | 99.41% | Date | Wed Jun 6 09:44:33 BST 2012 |
Rank | 86 | Aligned Residues | 53 |
% Identity | 26% | Template | c2j06B_ |
PDB info |
PDB header:signal transduction | Chain: B: PDB Molecule:ras gtpase-activating protein 1; |
PDBTitle: crystal structure of the rasgap sh3 domain at 1.8 angstrom2 resolution
|
Resolution | 1.8 Å |
|
 |
  |   |
1021 | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | |
. | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | |
|
. | . | . | . | . | 1070 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  | . | . |
|
|  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | G | V | A | Y | A | L | W | D | Y | E | A | Q | N | S | . |
D | E | L | S | F | H | E | G | D | A | L | T | I | L | R | R | K | D | E | S | E | T | E | W | W | W | A | R | L | . |
. |
G | D | R | E | G | Y | V | P | K | N | L | L |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |
|   |   |   | . |
|
|
|   |
|   |   |
|
|   |
|   |
|   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   | . | . |   |   |   |   |
|   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|
|
|   |
|   |
|   |   |
|   |
|
|
|
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   | . | . | . |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |
|
|
|
Template Sequence |   |
R | R | R | V | R | A | I | L | P | Y | T | K | V | P | D | T | D | E | I | S | F | L | K | G | D | X | F | I | V | H | N | E | L | E | D | G | . |
. |
. |
W | X | W | V | T | N | L | R | T | D | E | Q | G | L | I | V | E | D | L | V |
Template Known Secondary structure |   |
|
|  |  |  |  | S | S |
| B |
|
|
| T | T | S | S | B |
|
| B |
| T | T |
|  |  |  |  |  |  |  |
| G | G | G | . | . | . |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  | G | G | G |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . | . | . |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
281 | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | |
|
|
. | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|