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Job DescriptionQ96KQ4
Confidence98.67%DateWed Jun 6 09:44:33 BST 2012
Rank254Aligned Residues64
% Identity30%Templatec1ympB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:notch 1 protein; PDBTitle: the crystal structure of a partial mouse notch-1 ankyrin2 domain: repeats 4 through 7 preserve an ankyrin fold
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........920.........930.........940......
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Query Sequence  EVEDPSKPNDEGITPLHNAVCAGHHHIVKFLLDFGVN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEET
Template Known Secondary structure 

STT



TTS

T
TT

TT


TTS

TT
TT

TT


TT


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   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   947..950.........960.........970...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . VNAADSDGWTPLHCAASCNSVHLCKQL
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Template Sequence  PLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL
Template Known Secondary structure  T
TT

TT


TT


TT
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   187..190.........200.........210.........220.........230......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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