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Job DescriptionQ96KQ4
Confidence49.18%DateWed Jun 6 09:44:33 BST 2012
Rank368Aligned Residues196
% Identity12%Templatec2yfaA_
PDB info PDB header:receptorChain: A: PDB Molecule:methyl-accepting chemotaxis transducer; PDBTitle: x-ray structure of mcps ligand binding domain in complex with malate
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   116...120.........130.........140.. .......150.........160.........170 .........180.........190.
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Query Sequence  ENGVGNPRVELTLSELQDMAARQQQQI. ENQQQMLVAKEQRLHFLKQQERRQQQSI. . . SENEKLQKLKERVEAQENKLK
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Template Sequence  SHMGDIGQLNKDLTDLR. . IARLQYMIANGDDTAAANTLAKLDAFSKQQAYLATTFKSPENVKLLGELGDTISAYKLSLN
Template Known Secondary structure  ..TTT


S
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   48.50.........60.... .....70.........80.........90.........100.........110.........120.....
 
   192.......200.........210.........220..... ....230.........240.........250.........260....
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Query Sequence  KIRAMRGQVDYSKIMNGNLSAEIERFSAMFQEKK. . . . . . . QEVQTAILRVDQLSQQLEDLKKGKLNGFQSYNGKLTGPA
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Template Sequence  KMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAENSSANEQAA
Template Known Secondary structure  S
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   126...130.........140.........150.........160.........170.........180.........190.........200.....
 
   265....270.........280.........290.........300.........310...
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Query Sequence  AVELKRLYQELQIRNQLNQEQNSKLQQQKELLNKRNMEVAMMDKRISEL
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Template Sequence  LRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVANI
Template Known Secondary structure 
GGG
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   206...210.........220.........230.........240.........250....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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