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Job Description | Q96KQ4 | Confidence | 40.33% | Date | Wed Jun 6 09:44:33 BST 2012 |
Rank | 384 | Aligned Residues | 81 |
% Identity | 20% | Template | c2v4hA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:nf-kappa-b essential modulator; |
PDBTitle: nemo cc2-lz domain - 1d5 darpin complex
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Resolution | 2.9 Å |
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173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | E | K | L | Q | K | L | K | E | R | V | E | A | Q | E | N | K | L | K | K | I | R | A | M | R | G | Q | V | D | Y | S | K | I | M | N | G | N | L | S | A | E | I | E | R | F | S | A | M | F | Q | E | K | K | Q | E | V | Q | T | A | I | L | R | V | D | Q | L | S | Q | Q | L | E | D | L | K | K | G | K | L | N | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | Q | Q | L | Q | Q | A | E | E | A | L | V | A | K | Q | E | L | I | D | K | L | K | E | E | A | E | Q | H | K | I | V | M | E | T | V | P | V | L | K | A | Q | A | D | I | Y | K | A | D | F | Q | A | E | R | H | A | R | E | K | L | V | E | K | K | E | Y | L | Q | E | Q | L | E | Q | L | Q | R | E | F | N | K | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
257 | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . |
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253 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
F |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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337 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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