Return to main results Retrieve Phyre Job Id

Job DescriptionQ96KQ4
Confidence99.66%DateWed Jun 6 09:44:33 BST 2012
Rank3Aligned Residues63
% Identity29%Templatec1mv3A_
PDB info PDB header:endocytosis/exocytosisChain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1015....1020.........1030.........1040......... 1050.........1060.. .......1070.........
Predicted Secondary structure 























.....








..........






Query SS confidence 


































. . . . .












. . . . . . . . . .
















Query Sequence  KLGVMNKGVAYALWDYEAQNSDELSFHEGDALTIL. . . . . RRKDESETEWWWA. . . . . . . . . . RLGDREGYVPKNLLGLY
Query Conservation             
   
 
   


 
  

 
 
 .....   
     

  ..........      
  
 
     
Alig confidence 


































.....





...



..........
















Template Conservation             




 
    



  



 

        


...
  
             
  
 

 


   
Template Sequence  DLPPGFMFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEG. . . WLMGVKESDWNQHKKLEKCRGVFPENFTERV
Template Known Secondary structure  S

TT

SS
B


STT


B
SS



S
GGGS
TT...TGGGGGGT
STT
Template Predicted Secondary structure 

































...
















Template SS confidence 















































































   405....410.........420.........430.........440.........450 .........460.........470.........480.
 
   1080
Predicted Secondary structure 
Query SS confidence 
Query Sequence  P
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  P
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   482
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions