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Job DescriptionQ96KQ4
Confidence36.78%DateWed Jun 6 09:44:33 BST 2012
Rank400Aligned Residues233
% Identity7%Templatec3i2wB_
PDB info PDB header:endocytosisChain: B: PDB Molecule:syndapin; PDBTitle: crystal structure of efc/f-bar domain of drosophila2 syndapin/pacsin
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80.........90.........100.........110.........120.........130.........
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Query Sequence  HMMYEHLQKWGPRREEVKFFLRHEDSPTENSEQGGRQTQEQRTQRNVINVPGEKRTENGVGNPRVELTLSELQDMAARQQ
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Template Sequence  KRTTKRIEDGYKLCNDLQQLIQERADIEKGYAKSLRTWSKKWGELIE. . . . . . . . . . . . . . KGPEYGTTEAAWKGVLTES
Template Known Secondary structure  ..............SS

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   24.....30.........40.........50.........60.........70 .........80.........
 
   140.........150.........160.........170.........180.........190.........200.........210.........
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Query Sequence  QQIENQQQMLVAKEQRLHFLKQQERRQQQSISENEKLQKLKERVEAQENKLKKIRAMRGQVDYSKIMNGNLSAEIERFSA
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Template Conservation     
  
      
   
   
                  
            
        
 
  
     
 
    
Template Sequence  ERISDVHXKIKDNLCNDVNSQIKTWQKENYHHTLXQIKERKDLEDLFKKAQKPWAKLLAKVEKAKADYHSACKTERSATN
Template Known Secondary structure  T

TT
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   90.........100.........110.........120.........130.........140.........150.........160.........
 
   220.........230.........240.........250.........260.........270.........280.........290.........
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Query Sequence  MFQEKKQEVQTAILRVDQLSQQLEDLKKGKLNGFQSYNGKLTGPAAVELKRLYQELQIRNQLNQEQNSKLQQQKELLNKR
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Template Sequence  QERNANADSSLSPDQVKKXHDRVQKTKDQVQKCREKYEQAIAEITKYNSVYIEDXTSVFEKCQTFEKTRLQFFKEILFNV
Template Known Secondary structure  TTTT
TTS
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   170.........180.........190.........200.........210.........220.........230.........240.........
 
   300......
Predicted Secondary structure 
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Query Sequence  NMEVAMM
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Template Conservation     
   
Template Sequence  HSCLDLT
Template Known Secondary structure 
GG
Template Predicted Secondary structure 
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   250......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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