 |
Job Description | Q96KQ4 | Confidence | 99.42% | Date | Wed Jun 6 09:44:33 BST 2012 |
Rank | 76 | Aligned Residues | 52 |
% Identity | 33% | Template | c2a28D_ |
PDB info |
PDB header:signaling protein | Chain: D: PDB Molecule:bzz1 protein; |
PDBTitle: atomic-resolution crystal structure of the second sh32 domain of yeast bzz1 determined from a pseudomerohedrally3 twinned crystal
|
Resolution | 1.07 Å |
|
 |
  |   |
1022 | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | |
. | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  | . |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | V | A | Y | A | L | W | D | Y | E | A | Q | N | S | D | E | L | S | F | H | E | G | D | A | L | T | I | L | R | R | K | D | E | S | E | T | E | W | W | W | . |
A | R | L | G | D | R | E | G | Y | V | P | K | N | L | L |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |
|   |   |   |
|
|
|   |
|   |   |
|
|   |
|   |
|   |   |   |   |
|   |   |   |   |   |
|
|   | . |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|   |
|
|   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |
|   |
|
|   |   |   |   | . | . | . |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |
|
|
Template Sequence |   |
G | A | M | E | A | I | Y | A | Y | E | A | Q | G | D | D | E | I | S | I | D | P | G | D | I | I | T | V | I | R | G | D | D | . |
. |
. |
G | S | G | W | T | Y | G | E | C | D | G | L | K | G | L | F | P | T | S | Y | C |
Template Known Secondary structure |   |
|  |  |  | B |
| S |
| B |
|
|
| S | T | T | B |
|
| B |
| T | T |
|  |  |  |  |  |  |
|
|
| . | . | . | S | S | S |  |  |  |  |  |  | T | T |  |  |  |  |  |  | G | G | G | B |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
|
|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|