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Job DescriptionQ96KQ4
Confidence97.30%DateWed Jun 6 09:44:33 BST 2012
Rank283Aligned Residues254
% Identity9%Templatec1g8xB_
PDB info PDB header:structural proteinChain: B: PDB Molecule:myosin ii heavy chain fused to alpha-actinin 3; PDBTitle: structure of a genetically engineered molecular motor
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60......... 70.........80.........90.........100....
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Query Sequence  DVVEFCKEPGEGSCHLAEVWRGNERPIPFDHMMYEHLQKW. . . . . GPRREEVKFFLRHEDSPTENSEQGGRQTQEQRTQR
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Template Sequence  QLARIEEAREQRLGSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAI
Template Known Secondary structure  T




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   750.........760.........770.........780.........790.........800.........810.........820.........
 
   105....110.........120.........130.........140.........150.........160.........170.........180....
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Query Sequence  NVINVPGEKRTENGVGNPRVELTLSELQDMAARQQQQIENQQQMLVAKEQRLHFLKQQERRQQQSISENEKLQKLKERVE
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Template Sequence  YNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYL
Template Known Secondary structure  TTS





TT
STGGGTGG
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   830.........840.........850.........860.........870.........880.........890.........900.........
 
   185....190.........200.........210.........220.........230.. .......240.........250.........260...
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Query Sequence  AQENKLKKIRAMRGQVDYSKIMNGNLSAEIERFSAMFQEKKQEVQTAI. LRVDQLSQQLEDLKKGKLNGFQSYNGKLTGP
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Template Sequence  GSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNT
Template Known Secondary structure  G

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   910.........920.........930.........940.........950.........960.........970.........980.........
 
   264.....270.........280...
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Query Sequence  AAVELKRLYQELQIRNQLNQ
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Template Sequence  LLAELERLQKIEDLHHHHHH
Template Known Secondary structure  SGGGGT
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   990.........1000.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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