Return to main results Retrieve Phyre Job Id

Job DescriptionQ96KQ4
Confidence99.32%DateWed Jun 6 09:44:33 BST 2012
Rank160Aligned Residues56
% Identity27%Templatec2ke9A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:caskin-2; PDBTitle: nmr solution structure of the caskin sh3 domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1023......1030.... .....1040.........1050.........1060..... ....1070.........1080.
Predicted Secondary structure 





.



















......







Query SS confidence 











.






























. . . . . .















Query Sequence  VAYALWDYEAQN. SDELSFHEGDALTILRRKDESETEWWWARLG. . . . . . DREGYVPKNLLGLYPR
Query Conservation     
   
 
  . 


 
  

 
 
    
     

     ......   
  
 
       
Alig confidence 











.




















...






......















Template Conservation   






       



  



 

      ...

 
            
 

 



 
 
Template Sequence  KVRALKDFWNLHDPTALNVRAGDVITVLEQHPDG. . . RWKGHIHESQRGTDRIGYFPPGIVEVVSK
Template Known Secondary structure  SS
B


S
TTB

B
TT
S
SS
SS...


SSTTS



GGGSS

Template Predicted Secondary structure 

















...












Template SS confidence 

































































   285....290.........300.........310........ .320.........330.........340.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions