Return to main results Retrieve Phyre Job Id

Job DescriptionQ96KQ4
Confidence84.52%DateWed Jun 6 09:44:33 BST 2012
Rank326Aligned Residues299
% Identity11%Templatec2ch7A_
PDB info PDB header:chemotaxisChain: A: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: crystal structure of the cytoplasmic domain of a bacterial2 chemoreceptor from thermotoga maritima
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
Predicted Secondary structure 







Query SS confidence 















































































Query Sequence  QILTEVPITPETTCRDVVEFCKEPGEGSCHLAEVWRGNERPIPFDHMMYEHLQKWGPRREEVKFFLRHEDSPTENSEQGG
Query Conservation      
     
       

 
   
    
       
            
        
                   
Alig confidence 















































































Template Conservation    
  
      
      
      
      
      
                    
                  
Template Sequence  SHMKDVQTETFSVAESIEEISKANEEITNQLLGISKEMDNISTRIESISASVQETTAGSEEISSATKNIADSAQQAASFA
Template Known Secondary structure  TTT
Template Predicted Secondary structure 
Template SS confidence 















































































   222.......230.........240.........250.........260.........270.........280.........290.........300.
 
   95....100.........110.........120.........130.........140.........150.........160........
Predicted Secondary structure  ......
Query SS confidence 









































































. . . . . .
Query Sequence  RQTQEQRTQRNVINVPGEKRTENGVGNPRVELTLSELQDMAARQQQQIENQQQMLVAKEQRLHFLKQQERRQQQ. . . . . .
Query Conservation                                     
  
     
         
         
         ......
Alig confidence 

















...




















































......
Template Conservation                    ...                                           
  

  

  
    
Template Sequence  DQSTQLAKEAGDALKKVI. . . EVTRMISNSAKDVERVVESFQKGAEEITSFVETINAIAEQTNLLALNAAIEAARAGEAG
Template Known Secondary structure  ...TTTT
TT
Template Predicted Secondary structure  ...
Template SS confidence 















































































   302.......310......... 320.........330.........340.........350.........360.........370........
 
   169170.........180.........190.........200.........210.........220.........230.........240.....
Predicted Secondary structure  ...
Query SS confidence  . . .












































































Query Sequence  . . . SISENEKLQKLKERVEAQENKLKKIRAMRGQVDYSKIMNGNLSAEIERFSAMFQEKKQEVQTAILRVDQLSQQLEDL
Query Conservation  ...     
            
                         
 
                      
   
   
Alig confidence  ...












































































Template Conservation                         
      
                               
                
Template Sequence  RGFAVVADEIRKLAEESQQASENVRRVVNEIRSIAEDAGKVSSEITARVEEGTKLADEADEKLNSIVGAVERINEMLQNI
Template Known Secondary structure  TTTT
Template Predicted Secondary structure 
Template SS confidence 















































































   379380.........390.........400.........410.........420.........430.........440.........450........
 
   246...250.........260.........270.........280.........290.........300.........310.........320.
Predicted Secondary structure 


Query SS confidence 











































































Query Sequence  KKGKLNGFQSYNGKLTGPAAVELKRLYQELQIRNQLNQEQNSKLQQQKELLNKRNMEVAMMDKRISELRERLYGKK
Query Conservation                       
      
                     
     
          
        
Alig confidence 












.....

























































Template Conservation               .....
      
             
      
      
      
      
   
  

Template Sequence  AAAIEEQTAAVDE. . . . . ITTAMTENAKNAEEITNSVKEVNARLQEISASTEEVTSRVQTIRENVQMLKEIVARYK
Template Known Secondary structure  .....STTT
Template Predicted Secondary structure  .....

Template SS confidence 











































































   459460.........470. ........480.........490.........500.........510.........520.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions