Return to main results Retrieve Phyre Job Id

Job DescriptionQ96KQ4
Confidence45.91%DateWed Jun 6 09:44:33 BST 2012
Rank371Aligned Residues220
% Identity11%Templatec1qu7A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:methyl-accepting chemotaxis protein i; PDBTitle: four helical-bundle structure of the cytoplasmic domain of a serine2 chemotaxis receptor
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80.........90.........100....
Predicted Secondary structure 


Query SS confidence 















































































Query Sequence  ETTCRDVVEFCKEPGEGSCHLAEVWRGNERPIPFDHMMYEHLQKWGPRREEVKFFLRHEDSPTENSEQGGRQTQEQRTQR
Query Conservation 
       

 
   
    
       
            
        
                             
Alig confidence 















































































Template Conservation 
             

                                
         
             
  

  
Template Sequence  EQQAASLEQTAASMEQLTATVKQNAENARQASHLALSASETAQRGGKVVDNVVQTMRDISTSSQKIADIISVIDGIAFQT
Template Known Secondary structure  STTT
Template Predicted Secondary structure 
Template SS confidence 















































































   296...300.........310.........320.........330.........340.........350.........360.........370.....
 
   105....110...... ...120.........130.........140.........150.........160.........170.........180...
Predicted Secondary structure  .
Query SS confidence 











.


































































Query Sequence  NVINVPGEKRTE. NGVGNPRVELTLSELQDMAARQQQQIENQQQMLVAKEQRLHFLKQQERRQQQSISENEKLQKLKERV
Query Conservation              .             
  
     
         
         
              
         
Alig confidence 











.



















































.........





Template Conservation    

 

 







 
  
   
 

  

         
      
                .........      
Template Sequence  NILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAREIKSLIEDSVGKVDVGSTLVESAGE. . . . . . . . . TMAEIV
Template Known Secondary structure  TGGGTT.........
Template Predicted Secondary structure  .........
Template SS confidence 















































































   376...380.........390.........400.........410.........420.........430.........440 ......
 
   184.....190.........200.........210.........220.........230.........240.........250...
Predicted Secondary structure 
Query SS confidence 





































































Query Sequence  EAQENKLKKIRAMRGQVDYSKIMNGNLSAEIERFSAMFQEKKQEVQTAILRVDQLSQQLEDLKKGKLNGF
Query Conservation     
                         
 
                      
   
           
Alig confidence 





































































Template Conservation              
             
      
     
              
   
  
   
  

Template Sequence  SAVTRVTDIMGEIASASDEQSRGIDQVGLAVAEMDRVTQQNAALVEQSAAAAAALEEQASRLTEAVAVFR
Template Known Secondary structure  TTTT
Template Predicted Secondary structure 
Template SS confidence 





































































   447..450.........460.........470.........480.........490.........500.........510......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions