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Job Description | Q96KQ4 | Confidence | 99.07% | Date | Wed Jun 6 09:44:33 BST 2012 |
Rank | 218 | Aligned Residues | 84 |
% Identity | 21% | Template | c2fo1E_ |
PDB info |
PDB header:gene regulation/signalling protein/dna | Chain: E: PDB Molecule:lin-12 protein; |
PDBTitle: crystal structure of the csl-notch-mastermind ternary2 complex bound to dna
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Resolution | 3.12 Å |
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891 | . | . | . | . | . | . | . | . | 900 | . | . | . | . | . | . | . | . | |
. | 910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query Sequence |   |
L | L | L | D | A | S | L | E | G | E | F | D | L | V | Q | R | I | I | . |
Y | E | V | E | D | P | S | K | P | N | D | E | G | I | T | P | L | H | N | A | V | C | A | G | H | H | H | I | V | K | F | L | L | D | F | G | V | N | V | N | A | A | D | S | D | G | W | T | P | L | H | C | A | A | S | C | N | S | V | H | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | L | H | Y | A | A | Q | V | S | N | X | P | I | V | K | Y | L | V | G | E | K | G | S | N | K | D | K | Q | D | E | D | G | K | T | P | I | X | L | A | A | Q | E | G | R | I | E | V | V | X | Y | L | I | Q | Q | G | A | S | V | E | A | V | D | A | T | D | H | T | A | R | Q | L | A | Q | A | N | N | H | H | N | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
1210 | . | . | . | . | . | . | . | . | . | 1220 | . | . | . | . | . | . | . | . | . | 1230 | . | . | . | . | . | . | . | . | . | 1240 | . | . | . | . | . | . | . | . | . | 1250 | . | . | . | . | . | . | . | . | . | 1260 | . | . | . | . | . | . | . | . | . | 1270 | . | . | . | . | . | . | . | . | . | 1280 | . | . | . | . | . | . | . | . | . |
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970 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
C | K | Q | L | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | D | I | F | D |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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1290 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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