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Job DescriptionQ96KQ4
Confidence98.90%DateWed Jun 6 09:44:33 BST 2012
Rank233Aligned Residues91
% Identity26%Templatec2rfaA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:transient receptor potential cation channel subfamily v PDBTitle: crystal structure of the mouse trpv6 ankyrin repeat domain
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   890.........900......... 910.........920.........930.........940......
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Query Sequence  ALLLDASLEGEFDLVQRIIY. EVEDPSKPNDEGITPLHNAVCAGHHHIVKFLLDFGVN. . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  SPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVI
Template Known Secondary structure 
TT
TTT
S
TT


TTS

TT

GGGGG



STTTTT

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   47..50.........60.........70.........80.........90.........100.........110.........120......
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation                                                                                  
Template Sequence  NQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQ
Template Known Secondary structure  TT
TT

TT



SGGGS

TT
S



SST
TT

TT


TTS

T
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   127..130.........140.........150.........160.........170.........180.........190.........200......
 
   947..950.........960.........970.........980
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . VNAADSDGWTPLHCAASCNSVHLCKQLVESGAAI
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Template Sequence  PNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHI
Template Known Secondary structure  S
TT
S
SS

GGG


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T

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   207..210.........220.........230.........240.........250.........260.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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