Return to main results Retrieve Phyre Job Id

Job DescriptionQ96KQ4
Confidence99.50%DateWed Jun 6 09:44:33 BST 2012
Rank20Aligned Residues65
% Identity25%Templatec2e5kA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:suppressor of t-cell receptor signaling 1; PDBTitle: solution structure of sh3 domain in suppressor of t-cell2 receptor signaling 1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1020.........1030.........1040.........1050........ .1060.... .....1070.........1080....
Predicted Secondary structure 


























.
..










Query SS confidence 






































.





. .



















Query Sequence  NKGVAYALWDYEAQNSDELSFHEGDALTILRRKDESETE. WWWARL. . GDREGYVPKNLLGLYPRIKP
Query Conservation        
   
 
   


 
  

 
 
    
     .

    ..    
  
 
          
Alig confidence 






































.





..



















Template Conservation        




 
    



  

 
 
          

  
     
  
 

 



       
Template Sequence  NHETLQVIYPYTPQNDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITKADECST
Template Known Secondary structure 


S
B

SSSSB

B
TT

GGG

STTTTSSS

GGG

S


Template Predicted Secondary structure 



































Template SS confidence 



































































   255....260.........270.........280.........290.........300.........310.........320..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions