 |
Job Description | Q96KQ4 | Confidence | 99.46% | Date | Wed Jun 6 09:44:33 BST 2012 |
Rank | 40 | Aligned Residues | 66 |
% Identity | 29% | Template | c2yuoA_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:run and tbc1 domain containing 3; |
PDBTitle: solution structure of the sh3 domain of mouse run and tbc12 domain containing 3
|
Resolution | UNK |
|
 |
  |   |
1016 | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | G | V | M | N | K | G | V | A | Y | A | L | W | D | Y | E | A | Q | N | S | D | E | L | S | F | H | E | G | D | A | L | T | I | L | R | R | K | D | E | S | E | T | E | W | W | W | A | R | L | G | D | R | E | G | Y | V | P | K | N | L | L | G | L | Y | P | R | I | K | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |
|
|
|   |
|   |   |
|
|   |
|   |
|   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |   | . | . | . |
|   |   |
|   |   |   |
|   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |
Template Sequence |   |
S | S | G | S | S | G | R | R | A | K | A | L | L | D | F | E | R | H | D | D | D | E | L | G | F | R | K | N | D | I | I | T | I | I | S | Q | K | D | E | H | . |
. |
. |
C | W | V | G | E | L | N | G | L | R | G | W | F | P | A | K | F | V | E | V | L | D | E | R | S | K |
Template Known Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  | S | S |
| B |
|
| S | S | T | T | B |
|
| B |
| T | T |
|  |  |  |  |  |  |
|
| S | S | S | . | . | . |  |  |  |  |  |  | T | T |  |  |  |  |  |  | G | G | G |  |  |  |  |
|
|
|
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|