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Job DescriptionQ96KQ4
Confidence33.94%DateWed Jun 6 09:44:33 BST 2012
Rank408Aligned Residues299
% Identity9%Templatec2j69D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:bacterial dynamin-like protein; PDBTitle: bacterial dynamin-like protein bdlp
Resolution3.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60......... 70.........80.........90.........100..
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Query Sequence  ETTCRDVVEFCKEPGEGSCHLAEVWRGNERPIPFDHMMYEHLQKW. . GPRREEVKFFLRHEDSPTENSEQGGRQTQEQRT
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Template Conservation           
      
          
  
          
          
                           
Template Sequence  EAVARRIPLLEQDVNELKKRIDSVEPEFNKLTGIRDEFQKEIINTRDTQARTISESFRSYVLNLGNTFENDFLRYQPELN
Template Known Secondary structure  SSS
STTTTTTTTTT




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   348.350.........360.........370.........380.........390.........400.........410.........420.......
 
   103......110.........120.........130.........140.........150.........160.........170..
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Query Sequence  QRNVINVPGEKRTENGVGNPRVELTLSELQDMAARQQQQIENQQQMLVAKEQRLHFLKQQERRQQQSISE. . . . . . . . . .
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Template Sequence  LFDFLSSGKREAFNAALQKAFEQYITDKSAAWTLTAEKDINAAFKELSRSASQYGASYNQITDQITEKLTGKDVEEDNSP
Template Known Secondary structure  GGGGGSTTSS







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   428.430.........440.........450.........460.........470.........480.........490.........500.......
 
   173......180.........190.........200.........210.........220.........230..... ..
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Query Sequence  . . . . . . . . . . . . . NEKLQKLKERVEAQENKLKKIRAMRGQVDYSKIMNGNLSAEIERFSAMFQEKKQEVQTAILRV. . DQ
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Template Conservation                                                                              
   
Template Sequence  GWAKWAMGLLSAGFDWKNILLNYFTVIGIGGIITAVTGILLGPIGFALLGLGVGFLQADQARRELVKTAKKELVKHLPQV
Template Known Secondary structure  TS



S
TT
SSTTTTTTSS
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   516...520.........530.........540.........550.........560.........570.........580.........590.....
 
   238.240.........250.........260.........270.........280.........290.........300.........310.......
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Query Sequence  LSQQLEDLKKGKLNGFQSYNGKLTGPAAVELKRLYQELQIRNQLNQEQNSKLQQQKELLNKRNMEVAMMDKRISELRERL
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Template Sequence  AHEQSQVVYNAVKECFDSYEREVSKRINDDIVSRKSELDNLVKQKQTREINRESEFNRLKNLQEDVIAQLQKIEAAYSNL
Template Known Secondary structure  S



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   609610.........620.........630.........640.........650.........660.........670.........680........
 
   318.320...
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Query Sequence  YGKKIQ
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Template Conservation   
 
  
Template Sequence  LAYYSH
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   689690....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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