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Job DescriptionQ96KQ4
Confidence44.71%DateWed Jun 6 09:44:33 BST 2012
Rank373Aligned Residues231
% Identity11%Templatec3hajA_
PDB info PDB header:endocytosisChain: A: PDB Molecule:human pacsin2 f-bar; PDBTitle: crystal structure of human pacsin2 f-bar domain (p2121212 lattice)
Resolution2.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80.........90.........100.........110.........120.........130.........
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Query Sequence  HMMYEHLQKWGPRREEVKFFLRHEDSPTENSEQGGRQTQEQRTQRNVINVPGEKRTENGVGNPRVELTLSELQDMAARQQ
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Template Sequence  KRTVKRIDDGHRLCSDLMNCLHERARIEKAYAQQLTEWARRWR. . . . . . . . . . . . . QLVEKGPQYGTVEKAWMAFMSEAE
Template Known Secondary structure  .............SSS

S
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   26...30.........40.........50.........60........ .70.........80.........90..
 
   140.........150.........160.........170.........180.........190.........200.........210.........
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Query Sequence  QQIENQQQMLVAKEQRLHFLKQQERRQQQSISENEKLQKLKERVEAQENKLKKIRAMRGQVDYSKIMNGNLSAEIERFSA
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Template Sequence  RVSELHLEVKASLMNDDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHAACKEEKLAIS
Template Known Secondary structure  T

B
SSSSB
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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   220.........230.........240.........250.........260.........270.........280.........290.........
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Query Sequence  MFQEKKQEVQTAILRVDQLSQQLEDLKKGKLNGFQSYNGKLTGPAAVELKRLYQELQIRNQLNQEQNSKLQQQKELLNKR
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Template Sequence  REANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKEKYEKSLKELDQGTPQYMENMEQVFEQCQQFEEKRLRFFREVLLEV
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   173......180.........190.........200.........210.........220.........230.........240.........250..
 
   300...
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Query Sequence  NMEV
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Template Sequence  QKHL
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   253...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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