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Job DescriptionQ96KQ4
Confidence75.10%DateWed Jun 6 09:44:33 BST 2012
Rank335Aligned Residues116
% Identity17%Templatec2e7sM_
PDB info PDB header:endocytosis/exocytosisChain: M: PDB Molecule:rab guanine nucleotide exchange factor sec2; PDBTitle: crystal structure of the yeast sec2p gef domain
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   173......180.........190.........200.........210.........220.........230.........240.........250..
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Query Sequence  NEKLQKLKERVEAQENKLKKIRAMRGQVDYSKIMNGNLSAEIERFSAMFQEKKQEVQTAILRVDQLSQQLEDLKKGKLNG
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Template Sequence  EEQLNKSLKTIASQKAAIENYNQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLFDE
Template Known Secondary structure  TTTTTTTTT
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   32.......40.........50.........60.........70.........80.........90.........100.........110.
 
   253......260.........270.........280.........290......
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Query Sequence  FQSYNGKLTGPAAVELKRLYQELQIRNQLNQEQNSKLQQQKELL
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Template Conservation 

 

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Template Sequence  ANNLVA. . . . . . . . DARXEKYAIEILNKRLTEQLREKDXLLDTL
Template Known Secondary structure  ........TTGGGTTTTTTSSTTT
Template Predicted Secondary structure  ........

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   112..... ..120.........130.........140.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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