 |
Job Description | Q96KQ4 | Confidence | 99.42% | Date | Wed Jun 6 09:44:33 BST 2012 |
Rank | 79 | Aligned Residues | 74 |
% Identity | 20% | Template | c3qwxX_ |
PDB info |
PDB header:signaling protein | Chain: X: PDB Molecule:cell death abnormality protein 2; |
PDBTitle: ced-2 1-174
|
Resolution | 2.01 Å |
|
 |
  |   |
1002 | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | |
. | . | . | . | . | 1070 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  | . |
|
|  |  |  |  |  |
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | I | Q | C | S | Q | F | L | Y | G | V | Q | E | K | L | G | V | M | N | K | G | V | A | Y | A | L | W | D | Y | E | A | Q | N | S | D | E | L | S | F | H | E | G | D | A | L | T | I | L | R | R | K | D | E | S | E | T | E | W | W | W | A | R | L | . |
G | D | R | E | G | Y | V | P | K | N | L | L | G | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |
|
|
|   |
|   |   |
|
|   |
|   |
|   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   | . |   |   |   |   |
|   |   |
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|
|
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   | . | . | . |
|
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|
|
|
Template Sequence |   |
F | K | M | R | V | L | T | E | A | S | L | L | A | A | Y | K | K | P | I | I | E | V | V | V | G | T | F | K | F | T | G | E | R | E | T | D | L | P | F | E | Q | G | E | R | L | E | I | L | S | K | T | N | Q | D | . |
. |
. |
W | W | E | A | R | N | A | L | G | T | T | G | L | V | P | A | N | Y | V | Q | I |
Template Known Secondary structure |   |
T | T | S | S |
| S | S | S |
|
|
|
|  |  |
|
|
|
|
| S |  |  |  |  |  | S | S |
| B |
|
| S | S | T | T | B |
|
| B |
| T | T |
|  |  |  |  |  |  |
|
| S | S | S | . | . | . |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  | G | G | G |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | |
|
|
. | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|