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Job DescriptionQ96KQ4
Confidence97.62%DateWed Jun 6 09:44:33 BST 2012
Rank279Aligned Residues282
% Identity7%Templatec1c1gA_
PDB info PDB header:contractile proteinChain: A: PDB Molecule:tropomyosin; PDBTitle: crystal structure of tropomyosin at 7 angstroms resolution2 in the spermine-induced crystal form
Resolution7.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80.........90.........100....
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Query Sequence  ETTCRDVVEFCKEPGEGSCHLAEVWRGNERPIPFDHMMYEHLQKWGPRREEVKFFLRHEDSPTENSEQGGRQTQEQRTQR
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Template Sequence  DAIKKKMQMLKLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKYSEALKDAQEKLELAEKKATDA
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   105....110...... ...120.........130.........140.........150.........160.........170.........180...
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Query Sequence  NVINVPGEKRTE. NGVGNPRVELTLSELQDMAARQQQQIENQQQMLVAKEQRLHFLKQQERRQQQSISENEKLQKLKERV
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Template Sequence  EADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKH. . IAEDAD
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   82.......90.........100.........110.........120.........130.........140.........150... ......
 
   184.....190.........200.........210.........220.........230.........240.........250.........260...
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Query Sequence  EAQENKLKKIRAMRGQVDYSKIMNGNLSAEIERFSAMFQEKKQEVQTAILRVDQLSQQLEDLKKGKLNGFQSYNGKLTGP
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Template Sequence  RKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKE. . . . .
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   160.........170.........180.........190.........200.........210.........220.........230....
 
   264.....270.........280.........290.........300.........310...
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Query Sequence  AAVELKRLYQELQIRNQLNQEQNSKLQQQKELLNKRNMEVAMMDKRISEL
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Template Sequence  AETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI
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   235....240.........250.........260.........270.........280....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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