Job Description A1A5D9 Confidence 94.42% Date Fri May 25 10:16:11 BST 2012 Rank 7 Aligned Residues 161 % Identity 16% Template c3ojaA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:leucine-rich immune molecule 1; PDBTitle: crystal structure of lrim1/apl1c complex Resolution 2.70 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	R	D	S	F	L	G	G	G	P	G	P	E	E	P	E	D	L	A	L	Q	L	Q	Q	K	E	K	D	L	L	L	A	A	E	L	G	K	M	L	L	E	R	N	E	E	L	R	R	Q	L	E	T	L	S	A	Q	H	L	E	R	E	E	R	L	Q	Q	E	N	H	E	L	R	R	G	L	A	A	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	L	E	C	E	R	E	N	Q	A	R	Q	R	E	I	D	A	L	K	E	Q	Y	R	T	V	I	D	Q	V	T	L	R	K	Q	A	K	I	T	L	E	Q	K	K	K	A	L	D	E	Q	V	S	N	G	R	R	A	H	A	E	L	D	G	T	L	Q	Q	A	V	G	Q	I	E	L	Q	H	A	T	E	E
Template Known Secondary structure																								T																																														T	T	S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	W	E	A	R	A	V	E	L	E	G	D	V	E	A	L	R	A	Q	L	G	E	Q	R	S	E	Q	Q	D	S	G	R	E	R	A	R	A	L	S	E	L	S	E	Q	N	L	R	L	S	Q	Q	L	A	Q	A	S	Q	T	E	Q	E	L	Q	R	E	L	D	A	L	R	G	Q	C	Q	A	Q	A	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	S	P	L	Q	L	L	R	A	I	V	K	R	Y	E	E	M	Y	V	E	Q	Q	S	V	Q	N	N	A	I	R	D	W	D	M	Y	Q	H	K	E	T	Q	L	A	E	E	N	A	R	L	K	K	L	N	G	E	A	D	L	A	L	A	S	A	N	A	T	L	Q	E	L	V	V	R	E	Q	N	L	A	S	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
		192
Predicted Secondary structure
Query SS confidence
Query Sequence		G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		508

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions