Job Description A1A5D9 Confidence 26.76% Date Fri May 25 10:16:11 BST 2012 Rank 53 Aligned Residues 93 % Identity 9% Template c3a5tB_ PDB info PDB header:transcription regulator/dna Chain: B: PDB Molecule:transcription factor mafg; PDBTitle: crystal structure of mafg-dna complex Resolution 2.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	P	S	F	P	S	G	P	L	S	G	G	A	S	P	S	G	D	E	G	F	F	P	F	V	L	E	R	R	D	S	F	L	G	G	G	P	G	P	E	E	P	E	D	L	A	L	Q	L	Q	Q	K	E	K	D	L	L	L	A	A	E	L	G	K	M	L	L	E	R	N	E	E	L	R	R	Q	L	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	G	T	S	L	T	D	E	E	L	V	T	X	S	V	R	E	L	N	Q	H	L	R	G	L	S	K	E	E	I	I	Q	L	K	Q	R	R	R	T	L	K	N	R	G	Y	A	A	S	C	R	V	K	R	V	T	Q	K	E	E	L	E	K	Q	K	A	E	L	Q	Q	E	V	E	K	L	A	S	E	N	A	S
Template Known Secondary structure				S								T	T	S		S						T	T	S	S																																																		T	T	T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	A	Q	H	L	E	R	E	E	R	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	K	L	E	L	D	A	L	R	S	K	Y	E
Template Known Secondary structure					S	S	S					S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions