Job Description A1A5D9 Confidence 24.67% Date Fri May 25 10:16:11 BST 2012 Rank 55 Aligned Residues 164 % Identity 14% Template c2p22C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:protein srn2; PDBTitle: structure of the yeast escrt-i heterotetramer core Resolution 2.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	S	P	D	G	P	S	F	P	S	G	P	L	S	G	G	A	S	P	S	G	D	E	G	F	F	P	F	V	L	E	R	R	D	S	F	L	G	G	G	P	G	P	E	E	P	E	D	L	A	L	Q	L	Q	Q	K	E	K	D	L	L	L	A	A	E	L	G	K	M	L	L	E	R	N	E	E	L	R	R
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		V	P	S	P	G	L	P	S	K	N	.	I	P	L	P	E	G	I	N	L	L	S	S	K	E	I	I	D	L	I	Q	T	H	R	H	Q	L	E	L	Y	V	T	K	F	N	P	L	T	D	F	A	G	K	I	H	A	F	R	D	Q	F	K	Q	L	E	E	N	F	E	D	L	H	E	Q	K	D	K	V	Q	A
Template Known Secondary structure		S										.				S	S	G	G	G	S		T	T																		G	G	G	G	S
Template Predicted Secondary structure												.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																				.	.	.																										.	.
Query SS confidence																																				.	.	.																										.	.
Query Sequence		Q	L	E	T	L	S	A	Q	H	L	E	R	E	E	R	L	Q	Q	E	N	H	E	L	R	R	G	L	A	A	R	G	A	E	W	.	.	.	E	A	R	A	V	E	L	E	G	D	V	E	A	L	R	A	Q	L	G	E	Q	R	S	E	Q	.	.	Q	D	S	G	R	E	R	A	R	A	L	S	E	L	S	E
Query Conservation																																				.	.	.																										.	.
Alig confidence								.	.	.	.	.	.	.	.																					.	.	.																										.	.
Template Conservation								.	.	.	.	.	.	.	.
Template Sequence		L	L	E	N	A	R	.	.	.	.	.	.	.	.	I	L	E	S	K	Y	V	A	S	W	Q	D	Y	H	S	E	F	S	K	K	Y	G	D	I	A	L	K	K	K	L	E	Q	N	T	K	K	L	D	E	E	S	S	Q	L	E	T	T	T	R	S	I	D	S	A	D	D	L	D	Q	F	I	K	N	Y	L	D
Template Known Secondary structure								.	.	.	.	.	.	.	.																				T	S	S																									S		S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.									.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	L	R	L	S	Q	Q	L	A	Q	A	S	Q	T	E	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	T	Q	Y	H	L	R	R	E	K	L	A	T	W	D	K	Q
Template Known Secondary structure																	T	T
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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