Job Description A1A5D9 Confidence 54.98% Date Fri May 25 10:16:11 BST 2012 Rank 32 Aligned Residues 153 % Identity 14% Template c2efrB_ PDB info PDB header:contractile protein Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain; PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution Resolution 1.80 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	D	L	A	L	Q	L	Q	Q	K	E	K	D	L	L	L	A	A	E	L	G	K	M	L	L	E	R	N	E	E	L	R	R	Q	L	E	T	L	S	A	Q	H	L	E	R	E	E	R	L	Q	Q	E	N	H	E	L	R	R	G	L	A	A	R	G	A	E	W	E	A	R	A	V	E	L	E	G	D	V	E
Query Conservation
Alig confidence																																																											.
Template Conservation																																																											.
Template Sequence		M	K	Q	L	E	D	K	V	E	E	L	L	S	K	N	Y	H	L	E	N	E	V	A	R	L	K	K	L	L	E	R	A	E	E	R	A	E	L	S	E	G	K	S	A	E	L	E	E	E	L	K	T	V	T	N	N	L	.	K	S	L	E	A	Q	A	E	K	Y	S	Q	K	E	D	K	Y	E	E	E	I	K
Template Known Secondary structure																																																											.
Template Predicted Secondary structure																																																											.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	R	A	Q	L	G	E	Q	R	S	E	Q	Q	D	S	G	R	E	R	A	R	A	L	S	E	L	S	E	Q	N	L	R	L	S	Q	Q	L	A	Q	A	S	Q	T	E	Q	E	L	Q	R	E	L	D	A	L	R	G	Q	C	Q	A	Q	A	L	A	G	A	E	L	R	T	R	L	E	S	L	Q	G
Query Conservation
Alig confidence																															.	.	.	.
Template Conservation																															.	.	.	.
Template Sequence		V	L	S	D	K	L	K	E	A	E	T	R	A	E	F	A	E	R	S	V	T	K	L	E	K	S	I	D	D	.	.	.	.	L	E	D	E	L	Y	A	Q	K	L	K	Y	K	A	I	S	E	E	M	K	Q	L	E	D	K	V	E	E	L	L	S	K	N	Y	H	L	E	N	E	V	A	R	L	K	K
Template Known Secondary structure																															.	.	.	.																																												T	T
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.					.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions