Job Description O00459 Confidence 99.97% Date Fri May 25 09:44:30 BST 2012 Rank 18 Aligned Residues 181 % Identity 15% Template c3msxB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:rho gtpase-activating protein 20; PDBTitle: crystal structure of rhoa.gdp.mgf3 in complex with gap domain of2 arhgap20 Resolution 1.65 Å

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.									.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.
Query Sequence		A	P	E	P	G	L	T	L	P	D	L	P	E	Q	F	S	P	P	D	V	A	P	P	L	L	V	K	L	V	E	A	I	E	R	T	G	L	D	S	E	S	H	Y	R	P	E	L	P	A	P	R	T	D	W	.	.	.	.	.	.	.	.	S	L	S	D	V	D	Q	W	D	T	A	A	L	A	D	G	I	K
Query Conservation																																																								.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.																																					.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		G	Q	L	F	G	I	S	L	P	N	I	C	E	N	.	.	.	.	D	N	L	P	K	P	V	L	D	M	L	F	F	L	N	Q	K	G	P	L	T	K	G	I	F	R	Q	S	A	N	V	K	S	C	R	E	L	K	E	K	L	N	S	G	V	E	V	H	L	D	C	E	S	I	F	V	I	A	S	V	L	K
Template Known Secondary structure					T	T	S						S	G	G	.	.	.	.	G																	G	G	G	S	T	T	T	T	T	S																	T					T	T	S	S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.					.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		S	F	L	L	A	L	P	A	P	L	V	T	P	E	A	S	A	E	A	R	R	A	.	.	.	L	R	E	A	A	G	P	V	G	P	A	L	E	P	P	T	L	P	L	H	R	A	L	T	L	R	F	L	L	Q	H	L	G	R	V	A	S	R	A	P	A	L	G	P	A	V	R	A	L	G	A	T	F	G	P
Query Conservation																								.	.	.
Alig confidence																								.	.	.
Template Conservation
Template Sequence		D	F	L	R	N	I	P	G	S	I	F	S	S	D	L	Y	D	H	W	V	S	V	M	D	Q	G	N	D	E	E	K	I	N	T	V	Q	R	L	L	D	Q	L	P	R	A	N	V	V	L	L	R	Y	L	F	G	V	L	H	N	I	E	Q	H	S	S	S	N	Q	M	T	A	F	N	L	A	V	C	V	A	P
Template Known Secondary structure						T	S	T	T	T	T	T	T	G	G	G							G	G	G	S	S	S													T	T	S																				T	T
Template Predicted Secondary structure
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	R	A	P	P	P	P	S	S	P	P	P	G	G	A	P	D	G	S	E	P	S	P	D	F	P	A	L	L	V	E	K	L	L	Q	E	H
Query Conservation
Alig confidence																			.	.	.
Template Conservation																			.	.	.
Template Sequence		S	I	L	W	P	P	A	S	S	S	P	E	L	E	N	E	F	.	.	.	T	K	K	V	S	L	L	I	Q	F	L	I	E	N	C	L	R	I	F
Template Known Secondary structure								T	T	S									.	.	.
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.				.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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