Job Description O00459 Confidence 24.54% Date Fri May 25 09:44:30 BST 2012 Rank 410 Aligned Residues 92 % Identity 10% Template c3mkxC_ PDB info PDB header:antiviral protein Chain: C: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: crystal structure of bst2/tetherin Resolution 2.60 Å

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		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	Q	G	Q	T	Q	E	K	C	S	K	E	Y	L	E	R	F	R	R	E	G	N	E	K	E	M	Q	R	I	L	L	N	S	E	R	L	K	S	R	I	A	E	I	H	E	S	R	T	K	L	E	Q	Q	L	R	A	Q	A	S	D	N	R	E	I	D	K	R	M	N	S	L	K	P	D	L	M	Q	L	R
Query Conservation
Alig confidence																																							.
Template Conservation																																							.
Template Sequence		V	X	E	C	R	N	V	T	H	L	L	Q	Q	E	L	T	E	A	Q	K	G	F	Q	D	V	E	A	Q	A	A	T	C	N	H	T	V	X	.	A	L	X	A	S	L	D	A	E	K	A	Q	G	Q	K	K	V	E	E	L	E	G	E	I	T	T	L	N	H	K	L	Q	D	A	S	A	E	V	E	R	L	R
Template Known Secondary structure																																							.
Template Predicted Secondary structure																																							.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		572	.	.	.	.	.	.	.	580	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	R	D	Q	Y	L	V	W	L	T	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	N	Q	V	L	S	V	R	I	A	D	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions