Job Description O00459 Confidence 99.97% Date Fri May 25 09:44:30 BST 2012 Rank 19 Aligned Residues 176 % Identity 15% Template c3kuqA_ PDB info PDB header:hydrolase activator Chain: A: PDB Molecule:rho gtpase-activating protein 7; PDBTitle: crystal structure of the dlc1 rhogap domain Resolution 2.30 Å

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		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.										.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.
Query Sequence		G	A	P	E	P	G	L	T	L	P	D	L	P	E	Q	F	S	P	P	D	V	A	P	P	L	L	V	K	L	V	E	A	I	E	R	T	G	L	D	S	E	S	H	Y	R	P	E	L	P	A	P	R	T	D	W	.	.	.	.	.	.	.	.	.	S	L	S	D	V	D	Q	W	D	T	A	A	L	A	D	G
Query Conservation																																																									.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																																						.	.	.	.	.	.	.	.	.
Template Conservation																		.	.
Template Sequence		Q	G	S	V	F	G	V	P	L	T	V	N	V	Q	R	T	.	.	G	Q	P	L	P	Q	S	I	Q	Q	A	M	R	Y	L	R	N	H	C	L	D	Q	V	G	L	F	R	K	S	G	V	K	S	R	I	Q	A	L	R	Q	M	N	E	G	A	I	D	C	V	N	Y	E	G	Q	S	A	Y	D	V	A	D	M
Template Known Secondary structure		T	T	S	S	T	T											.	.	S	S	S	S																T	T	S	T	T	T	T	T	S															T	B	S	S	S					T	T
Template Predicted Secondary structure																		.	.
Template SS confidence
		1072	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.			.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		I	K	S	F	L	L	A	L	P	A	P	L	V	T	P	E	A	S	A	E	A	R	R	A	.	.	.	L	R	E	A	A	G	P	V	G	P	A	L	E	P	P	T	L	P	L	H	R	A	L	T	L	R	F	L	L	Q	H	L	G	R	V	A	S	R	A	P	A	L	G	P	A	V	R	A	L	G	A	T	F
Query Conservation																										.	.	.
Alig confidence																										.	.	.
Template Conservation
Template Sequence		L	K	Q	Y	F	R	D	L	P	E	P	L	M	T	N	K	L	S	E	T	F	L	Q	I	Y	Q	Y	V	P	K	D	Q	R	L	Q	A	I	K	A	A	I	M	L	L	P	D	E	N	R	E	V	L	Q	T	L	L	Y	F	L	S	D	V	T	A	A	V	K	E	N	Q	M	T	P	T	N	L	A	V	C	L
Template Known Secondary structure									S	S	S		T	T		S	S												S		G	G	G											T	S																					T
Template Predicted Secondary structure
Template SS confidence
		1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	L	L	L	R	A	P	P	P	P	S	S	P	P	P	G	G	A	P	D	G	S	E	P	S	P	D	F	P	A	L	L	V	E	K	L	L
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.
Template Sequence		A	P	S	L	F	H	L	N	.	.	.	.	.	.	.	.	T	L	D	Q	K	D	L	N	E	N	L	A	A	T	Q	G	L	A	H	M	I	A
Template Known Secondary structure							T			.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.
Template SS confidence
		1230	.	.	.	.	.	.	.									.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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