Job Description O00459 Confidence 97.73% Date Fri May 25 09:44:30 BST 2012 Rank 298 Aligned Residues 58 % Identity 21% Template c2vknA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:protein ssu81; PDBTitle: yeast sho1 sh3 domain complexed with a peptide from pbs2 Resolution 2.05 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		F	Q	Y	R	A	L	Y	P	F	R	R	E	R	P	E	.	.	D	L	E	L	L	P	G	D	V	L	V	V	S	R	A	A	L	Q	A	L	G	V	A	E	G	G	E	R	C	P	Q	S	V	G	W	M	P	G	L	N	E	R	T	R	Q	R	G	D	F	P	G	T	Y	V	E	F	L	G	P	V
Query Conservation																	.	.
Alig confidence																	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		Y	K	A	K	A	L	Y	P	Y	D	A	D	D	D	D	A	Y	E	I	S	F	E	Q	N	E	I	L	Q	V	S	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	R	W	W	K	A	R	.	.	R	A	N	G	E	T	G	I	I	P	S	N	Y	V	Q	L	I	D	G	P
Template Known Secondary structure							S	S		B				S	S	S	T	T	B			B		T	T								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S						.	.		T	T	S							G	G	G
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions