Job Description O00459 Confidence 98.18% Date Fri May 25 09:44:30 BST 2012 Rank 177 Aligned Residues 55 % Identity 35% Template c2nwmA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:vinexin; PDBTitle: solution structure of the first sh3 domain of human vinexin2 and its interaction with the peptides from vinculin Resolution UNK

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	L	Y	P	F	R	R	E	R	P	E	D	L	E	L	L	P	G	D	V	L	V	V	S	R	A	A	L	Q	A	L	G	V	A	E	G	G	E	R	C	P	Q	S	V	G	W	M	P	G	L	N	E	R	T	R	Q	R	G	D	F	P	G	T	Y	V	E	F	L	G	P	V
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		R	L	K	F	D	F	Q	A	Q	S	P	K	E	L	T	L	Q	K	G	D	I	V	Y	I	H	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	K	N	W	L	E	G	.	.	E	H	H	G	R	L	G	I	F	P	A	N	Y	V	E	V	L	P	L	E
Template Known Secondary structure					S		B				S	T	T	B			B		T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T					.	.			T	T							G	G	G
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30																.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions