Job Description O00459 Confidence 99.97% Date Fri May 25 09:44:30 BST 2012 Rank 14 Aligned Residues 184 % Identity 21% Template c2ngrB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:protein (gtpase activating protein (rhg)); PDBTitle: transition state complex for gtp hydrolysis by cdc42:2 comparisons of the high resolution structures for cdc423 bound to the active and catalytically compromised forms of4 the cdc42-gap. Resolution 1.90 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.										.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.
Query Sequence		D	G	A	P	E	P	G	L	T	L	P	D	L	P	E	Q	F	S	P	P	D	V	A	P	P	L	L	V	K	L	V	E	A	I	E	R	T	G	L	D	S	E	S	H	Y	R	P	E	L	P	A	P	R	T	D	W	.	.	.	.	.	.	.	.	.	S	L	S	D	V	D	Q	W	D	T	A	A	L	A	D
Query Conservation																																																										.	.	.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	N	Q	Q	F	G	V	S	L	Q	H	L	Q	E	K	N	P	E	Q	E	P	I	P	I	V	L	R	E	T	V	A	Y	L	Q	A	H	A	L	T	T	E	G	I	F	A	R	S	A	N	T	Q	V	V	R	E	V	Q	Q	K	Y	N	M	G	L	P	V	D	F	D	Q	Y	N	E	L	H	L	P	A	V
Template Known Secondary structure			T	T			S	S									T		S	S			S	S																T	T		T	T	T	T	T	S																T	T					T	T	S	S			S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		G	I	K	S	F	L	L	A	L	P	A	P	L	V	T	P	E	A	S	A	E	A	R	R	A	L	.	.	R	E	A	A	G	P	V	G	P	A	L	E	P	P	T	L	P	L	H	R	A	L	T	L	R	F	L	L	Q	H	L	G	R	V	A	S	R	A	P	A	L	G	P	A	V	R	A	L	G	A	T	F
Query Conservation																												.	.
Alig confidence																												.	.
Template Conservation
Template Sequence		I	L	K	T	F	L	R	E	L	P	E	P	L	L	T	F	D	L	Y	P	H	V	V	G	F	L	N	I	D	E	S	Q	R	V	P	A	T	L	Q	V	L	Q	T	L	P	E	E	N	Y	Q	V	L	R	F	L	T	A	F	L	V	Q	I	S	A	H	S	D	Q	N	K	M	T	N	T	N	L	A	V	V	F
Template Known Secondary structure									T	S	S	S		T	T		G	G	G						T	G	G	G	S		G	G	G										T	T	S																					T
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	L	L	L	R	A	P	P	P	P	S	S	P	P	P	G	G	A	P	D	G	S	E	P	S	P	D	F	P	A	L	L	V	E	K	L	L	Q	E	H
Query Conservation
Alig confidence											.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.
Template Sequence		G	P	N	L	L	W	A	K	D	.	.	.	.	.	.	A	A	I	T	L	K	A	I	N	P	I	N	T	F	T	K	F	L	L	D	H	Q	G	E	L	F
Template Known Secondary structure									S	S	.	.	.	.	.	.																					T
Template Predicted Secondary structure											.	.	.	.	.	.
Template SS confidence
		420	.	.	.	.	.	.	.	.							.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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