Job Description O00459 Confidence 99.87% Date Fri May 25 09:44:30 BST 2012 Rank 43 Aligned Residues 105 % Identity 29% Template c2lctA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:proto-oncogene vav; PDBTitle: solution structure of the vav1 sh2 domain complexed with a syk-derived2 doubly phosphorylated peptide Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.		650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		D	D	L	P	H	H	E	E	R	T	W	Y	V	G	K	I	N	R	T	Q	A	E	E	M	L	S	G	K	R	D	G	T	F	L	I	R	E	S	.	S	Q	R	G	C	Y	A	C	S	V	V	V	D	G	D	T	K	H	C	V	I	Y	R	T	A	T	G	F	G	F	A	E	P	Y	N	L	Y	G	S	L	K
Query Conservation																																								.
Alig confidence																																								.																													.
Template Conservation																																																																					.
Template Sequence		G	H	M	Q	D	L	S	V	H	L	W	Y	A	G	P	M	E	R	A	G	A	E	S	I	L	A	N	R	S	D	G	T	F	L	V	R	Q	R	V	K	D	A	A	E	F	A	I	S	I	K	Y	N	V	E	V	K	H	I	K	I	M	T	A	E	G	L	Y	.	R	I	T	E	K	K	A	F	R	G	L	T
Template Known Secondary structure				S	S		S	T	T	S	S	S				S													S		T	T	B								S	S	S		S								S	S	S										T	T			.		S	S	S	S	S			S	S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		661	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.		.	.	730	.	.	.	.	.	.	.	.	.
		691	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	L	H	Y	Q	H	A	S	L	V	Q	H	N	D	A	L	T	V	T	L	A	H	P	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	V	E	F	Y	Q	Q	N	S	L	K	D	C	F	K	S	L	D	T	T	L	Q	F	P	F	K
Template Known Secondary structure								T	T	S						S	S	S							B		S
Template Predicted Secondary structure
Template SS confidence
		740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions