Return to main results Retrieve Phyre Job Id

Job DescriptionO00459
Confidence98.22%DateFri May 25 09:44:30 BST 2012
Rank164Aligned Residues74
% Identity22%Templatec2kymA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:bud emergence protein 1; PDBTitle: solution structure of the bem1p sh3-ci domain from l.elongisporus in2 complex with ste20p peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50......... 60.........70.........80...
Predicted Secondary structure 










































.


















Query SS confidence 






















































.























Query Sequence  EGFQYRALYPFRRERPEDLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPG. LNERTRQRGDFPGTYVEFLGPVAL
Query Conservation                                                        
.        
  
   
        
Alig confidence 































...............







.























Template Conservation     

 




 
    


   

 
 

  ...............    
         
  
 

 



       
Template Sequence  APLFAVTLYEFKAERDDELDVSPGENLSICAH. . . . . . . . . . . . . . . YDYEWFIAKPINRLGGPGLVPVSYVRIIDLMDP
Template Known Secondary structure 



S
B


STT


B
TT
...............TTTSSS
S



GGG
SS
T
Template Predicted Secondary structure 














...............














Template SS confidence 















































































  
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions