Job Description O00459 Confidence 97.81% Date Fri May 25 09:44:30 BST 2012 Rank 290 Aligned Residues 63 % Identity 17% Template c2jw4A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: nmr solution structure of the n-terminal sh3 domain of2 human nckalpha Resolution UNK

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	A	L	Y	P	F	R	R	E	R	P	E	D	L	E	L	L	P	G	D	V	L	V	V	S	R	A	A	L	Q	A	L	G	V	A	E	G	G	E	R	C	P	Q	S	V	G	W	M	P	G	L	N	E	R	T	R	Q	R	G	D	F	P	G	T	Y	V	E	F	L	G	P	V	A	L	A	R	P	G	P
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		V	V	A	K	F	D	Y	V	A	Q	Q	E	Q	E	L	D	I	K	K	N	E	R	L	W	L	L	D	D	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	W	R	V	R	N	S	M	N	K	.	T	G	F	V	P	S	N	Y	V	E	R	K	N	S	A	R	A	A	A	N	S	S
Template Known Secondary structure					S	S					S	S	T	T	S					T	T									S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S						T	T	S		.						T	T	S									S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions