Job Description O00459 Confidence 98.07% Date Fri May 25 09:44:30 BST 2012 Rank 233 Aligned Residues 56 % Identity 29% Template c2j6kE_ PDB info PDB header:protein binding Chain: E: PDB Molecule:cd2-associated protein; PDBTitle: n-terminal sh3 domain of cms (cd2ap human homolog) Resolution 2.78 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	Y	R	A	L	Y	P	F	R	R	E	R	P	E	D	L	E	L	L	P	G	D	V	L	V	V	S	R	A	A	L	Q	A	L	G	V	A	E	G	G	E	R	C	P	Q	S	V	G	W	M	P	G	L	N	E	R	T	R	Q	R	G	D	F	P	G	T	Y	V	E	F	L
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		V	D	Y	I	V	E	Y	D	Y	D	A	V	H	D	D	E	L	T	I	R	V	G	E	I	I	R	N	V	K	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	E	G	W	L	E	G	.	.	E	L	N	G	R	R	G	M	F	P	D	N	F	V	K	E	I
Template Known Secondary structure								S		B			S	S	T	T	B			B		T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	T	T					.	.			T	T							G	G	G
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.															.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions