Job Description O00459 Confidence 99.75% Date Fri May 25 09:44:30 BST 2012 Rank 100 Aligned Residues 116 % Identity 24% Template c2izvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:suppressor of cytokine signaling 4; PDBTitle: crystal structure of socs-4 in complex with elongin-b and2 elongin-c at 2.55a resolution Resolution 2.55 Å

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		605	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.		650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		Y	A	L	M	E	D	E	D	D	L	P	H	H	E	E	R	T	W	Y	V	G	K	I	N	R	T	Q	A	E	E	M	L	S	G	K	R	D	G	T	F	L	I	R	E	S	.	S	Q	R	G	C	Y	A	C	S	V	V	V	D	G	D	T	K	H	C	V	I	Y	R	T	A	T	G	F	G	F	A	E	P	Y
Query Conservation																																															.
Alig confidence																																															.
Template Conservation
Template Sequence		Y	F	Q	S	M	L	V	P	D	L	L	Q	I	N	N	N	P	C	Y	W	G	V	M	D	K	Y	A	A	E	A	L	L	E	G	K	P	E	G	T	F	L	L	R	D	S	A	Q	E	D	Y	L	F	S	V	S	F	R	R	Y	S	R	S	L	H	A	R	I	E	Q	W	N	H	N	F	S	F	D	A	H	D
Template Known Secondary structure		S							T	T								T	T															T	T			T	T								S	S	T	T		S								T	T											T	T				S		T	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		684				.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		N	.	.	.	L	Y	G	S	L	K	E	L	V	L	H	Y	Q	H	A	S	L	V	Q	H	N	D	A	L	T	V	T	L	A	H	P	V	R	A	P	G	P	G	P
Query Conservation			.	.	.
Alig confidence			.	.	.																	.	.	.
Template Conservation																						.	.	.
Template Sequence		P	C	V	F	H	S	P	D	I	T	G	L	L	E	H	Y	K	D	P	S	.	.	.	A	C	M	F	F	E	P	L	L	S	T	P	L	I	R	T	F	P	F	S
Template Known Secondary structure		T	T	S			B	S	S								T			G	G	.	.	.	G			T	T	S											S
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions