Job Description O00459 Confidence 99.97% Date Fri May 25 09:44:30 BST 2012 Rank 11 Aligned Residues 205 % Identity 20% Template c2ee5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:rho gtpase activating protein 5 variant; PDBTitle: solution structure of the n-teruminus extended rhogap2 domain from human rho gtpase activating protein 5 variant Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		P	G	P	R	P	R	G	P	R	P	L	P	A	R	P	R	D	G	A	P	E	P	G	L	T	L	P	D	L	P	E	Q	F	S	P	P	D	V	A	P	P	L	L	V	K	L	V	E	A	I	E	R	T	G	L	D	S	E	S	H	Y	R	P	E	L	P	A	P	R	T	D	W	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.																																						.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.
Template Sequence		S	S	G	S	S	G	K	N	F	N	P	P	T	R	R	N	W	E	S	N	Y	F	G	M	P	L	Q	D	L	V	T	A	.	.	.	E	K	P	I	P	L	F	V	E	K	C	V	E	F	I	E	D	T	G	L	C	T	E	G	L	Y	R	V	S	G	N	K	T	D	Q	D	N	I	Q	K	Q	F	D	Q	D
Template Known Secondary structure																	S				T	T	T	T	S						S		S	.	.	.	S			S														T		S			T	T	T	T	T					S
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
				158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.				.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure		.	.																																										.	.	.
Query SS confidence		.	.																																										.	.	.
Query Sequence		.	.	S	L	S	D	V	D	Q	W	D	T	A	A	L	A	D	G	I	K	S	F	L	L	A	L	P	A	P	L	V	T	P	E	A	S	A	E	A	R	R	A	L	.	.	.	R	E	A	A	G	P	V	G	P	A	L	E	P	P	T	L	P	L	H	R	A	L	T	L	R	F	L	L	Q	H	L	G	R	V
Query Conservation		.	.																																										.	.	.
Alig confidence		.	.																																										.	.	.
Template Conservation
Template Sequence		H	N	I	N	L	V	S	M	E	V	T	V	N	A	V	A	G	A	L	K	A	F	F	A	D	L	P	D	P	L	I	P	Y	S	L	H	P	E	L	L	E	A	A	K	I	P	D	K	T	E	R	L	H	A	L	K	E	I	V	K	K	F	H	P	V	N	Y	D	V	F	R	Y	V	I	T	H	L	N	R	V
Template Known Secondary structure		T	T							T																	S	S	S		S	S		G	G	G							T	T	S		S	S												T	T	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	R	A	P	A	L	G	P	A	V	R	A	L	G	A	T	F	G	P	L	L	L	R	A	P	P	P	P	S	S	P	P	P	G	G	A	P	D	G	S	E	P	S	P	D	F	P	A	L	L	V	E	K	L	L	Q	E	H	L	E	E	Q	E	V	A
Query Conservation
Alig confidence																																.	.	.	.	.
Template Conservation																																.	.	.	.	.
Template Sequence		S	Q	Q	H	K	I	N	L	M	T	A	D	N	L	S	I	C	F	W	P	T	L	M	R	P	D	F	E	N	R	.	.	.	.	.	E	F	L	S	T	T	K	I	H	Q	S	V	V	E	T	F	I	Q	Q	C	Q	F	F	F	Y	N	G	E	I	V	E
Template Known Secondary structure				T															T									S			S	.	.	.	.	.	S	S					S												T						T
Template Predicted Secondary structure																																.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions