 |
| Job Description | O00459 | | Confidence | 98.09% | Date | Fri May 25 09:44:30 BST 2012 |
| Rank | 221 | Aligned Residues | 66 |
| % Identity | 20% | Template | c2ebpA_ |
| PDB info |
PDB header:cell adhesion | Chain: A: PDB Molecule:sam and sh3 domain-containing protein 1; |
PDBTitle: solution structure of the sh3 domain from human sam and sh32 domain containing protein 1
|
| Resolution | UNK |
|
 |
|   |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | |
|
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | G | P | E | G | F | Q | Y | R | A | L | Y | P | F | . |
. |
R | R | E | R | P | E | D | L | E | L | L | P | G | D | V | L | V | V | S | R | A | A | L | Q | A | L | G | V | A | E | G | G | E | R | C | P | Q | S | V | G | W | M | P | G | L | N | E | R | T | R | Q | R | G | D | F | P | G | T | Y | V | E | F | L | G |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|   |   |
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|
|
|
|   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|
|   |
| . | . |   |   |   |
|   |   |
|   |
|
|   |   |
|
|
|   |
|   |
| Template Sequence |   |
S | S | G | F | C | G | R | A | R | V | H | T | D | F | T | P | S | P | Y | D | T | D | S | L | K | L | K | K | G | D | I | I | D | I | I | S | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | P | M | G | T | W | M | G | . |
. |
L | L | N | N | K | V | G | T | F | K | F | I | Y | V | D | V | L | S |
| Template Known Secondary structure |   |
|
|
|
| S |  |  |  |  |  |
| S |
| B |
|
|
| T | T |
|
| S | B |
|
| B |
| S | S |
|  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| S | S | S |
|  |  |  | . | . |  |
| S | S |
|  |  |  |  |
| S | T | T |  |  |  |
|
|
| Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  | . | . |  |
|
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | |
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
|   |
|   |   |
80 | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
| Query Sequence |   |
P | V | A | L | A |
| Query Conservation |   |
  |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |
|
| Template Sequence |   |
S | G | P | S | S |
| Template Known Secondary structure |   |
|
| S |
|
|
| Template Predicted Secondary structure |   |
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|   |   |
68 | . | 70 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|