Job Description O00459 Confidence 98.06% Date Fri May 25 09:44:30 BST 2012 Rank 235 Aligned Residues 64 % Identity 28% Template c1wx6A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cytoplasmic protein nck2; PDBTitle: solution structure of the sh3 domain of the human2 cytoplasmic protein nck2 Resolution UNK

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	A	L	Y	P	F	R	R	E	R	P	E	D	L	E	L	L	P	G	D	V	L	V	V	S	R	A	A	L	Q	A	L	G	V	A	E	G	G	E	R	C	P	Q	S	V	G	W	M	P	G	L	N	E	R	T	R	Q	R	G	D	F	P	G	T	Y	V	E	F	L	G	P	V	A	L	A	R	P
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		V	Q	T	L	Y	P	F	S	S	V	T	E	E	E	L	N	F	E	K	G	E	T	M	E	V	I	E	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	D	P	E	W	W	K	C	K	N	A	R	G	.	Q	V	G	L	V	P	K	N	Y	V	V	V	L	S	D	G	P	A	L	H	P
Template Known Secondary structure					S	S					S	S	S	S	B					T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		T	T							T	T		.							G	G	G							S	S	S		S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.														.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions