Job Description O00459 Confidence 98.12% Date Fri May 25 09:44:30 BST 2012 Rank 205 Aligned Residues 59 % Identity 27% Template c1s1nA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:nephrocystin 1; PDBTitle: sh3 domain of human nephrocystin Resolution UNK

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	Q	Y	R	A	L	Y	P	F	R	R	E	R	P	E	D	L	E	L	L	P	G	D	V	L	V	V	S	R	A	A	L	Q	A	L	G	V	A	E	G	G	E	R	C	P	Q	S	V	G	W	M	P	G	L	N	E	R	T	R	Q	R	G	D	F	P	G	T	Y	V	E	F	L	G	P
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		G	E	E	Y	I	A	V	G	D	F	T	A	Q	Q	V	G	D	L	T	F	K	K	G	E	I	L	L	V	I	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	D	G	W	W	I	A	K	D	A	K	G	N	E	.	G	L	V	P	R	T	Y	L	E	P	Y	S	E
Template Known Secondary structure									S		B			S	S	S	S				B		S	S							S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S							S	S	S			.					S	T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.																.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions