Job Description O00459 Confidence 87.85% Date Fri May 25 09:44:30 BST 2012 Rank 337 Aligned Residues 54 % Identity 35% Template c1kjwA_ PDB info PDB header:neuropeptide Chain: A: PDB Molecule:postsynaptic density protein 95; PDBTitle: sh3-guanylate kinase module from psd-95 Resolution 1.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.						.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.																																					.	.	.	.
Query SS confidence																		.	.	.	.	.																																					.	.	.	.
Query Sequence		G	F	Q	Y	R	A	L	Y	P	F	R	R	E	R	P	E	.	.	.	.	.	D	L	E	L	L	P	G	D	V	L	V	V	S	R	A	A	L	Q	A	L	G	V	A	E	G	G	E	R	C	P	Q	S	V	G	W	M	.	.	.	.	P	G	L	N	E	R	T	R	Q	R	G	D	F	P	G	T	Y
Query Conservation																		.	.	.	.	.																																					.	.	.	.
Alig confidence																		.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	F	Y	I	R	A	L	F	D	Y	D	K	T	K	D	C	G	F	L	S	Q	A	L	S	F	R	F	G	D	V	L	H	V	I	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	E	E	W	W	Q	A	R	R	V	H	S	D	S	E	T	D	D	I	G	F	I	P	S	K	R
Template Known Secondary structure								S	S		B										S	S	B			B		T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S									S	S				S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.																.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions