Phyre 2 alignment of O00459 with d1g6pa_

Return to main results | Retrieve Phyre Job Id

Job Description | O00459
Confidence | 23.02% | Date | Fri May 25 09:44:30 BST 2012
Rank | 414 | Aligned Residues | 18
% Identity | 28% | Template | d1g6pa_
SCOP info | OB-fold | Nucleic acid-binding proteins | Cold shock DNA-binding domain-like
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 662 | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | G | D | T | K | H | C | V | I | Y | R | T | A | T | G | F | G | F | A | E | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | G | K | V | K | W | F | . | . | . | D | S | K | K | G | Y | G | F | I | T | K
Template Known Secondary structure |  |  |  |  |  |  |  |  | . | . | . |  | T | T | T | T |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 2 | . | . | . | . | . | . |  |  |  | . | 10 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions