Phyre 2 alignment of O00459 with c3shwA_

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Job Description | O00459
Confidence | 42.46% | Date | Fri May 25 09:44:30 BST 2012
Rank | 387 | Aligned Residues | 39
% Identity | 23% | Template | c3shwA_
PDB info | PDB header:cell adhesion | Chain: A: PDB Molecule:tight junction protein zo-1; | PDBTitle: crystal structure of zo-1 pdz3-sh3-guk supramodule complex with2 connexin-45 peptide
Resolution | 2.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | Q | Y | R | A | L | Y | P | F | R | R | E | R | P | E | D | L | E | L | L | P | G | D | V | L | V | V | S | R | A | A | L | Q | A | L | G | V | A | E | G | G | E | R | C | P | Q | S | V | G | W | M
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Template Sequence |  | F | Y | I | R | T | H | F | E | Y | E | K | E | S | P | Y | G | L | S | F | N | K | G | E | V | F | R | V | V | D | T | L | Y | . | . | . | . | . | . | . | . | . | . | . | . | N | G | K | L | G | S | W
Template Known Secondary structure |  |  |  |  |  |  |  | S |  | B |  |  | S | S | T | T | B |  |  | B |  | T | T |  |  |  |  |  |  |  | S | S | G | . | . | . | . | . | . | . | . | . | . | . | . | G | G |  | T | T |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 519 | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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