Phyre 2 alignment of O00459 with c1bf5A_

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Job Description | O00459
Confidence | 97.34% | Date | Fri May 25 09:44:30 BST 2012
Rank | 312 | Aligned Residues | 42
% Identity | 31% | Template | c1bf5A_
PDB info | PDB header:gene regulation/dna | Chain: A: PDB Molecule:signal transducer and activator of transcription | PDBTitle: tyrosine phosphorylated stat-1/dna complex
Resolution | 2.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 622 | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . |  | 650 | . | . |  | . | . | . | . | . | . | . | 660 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | W | Y | V | G | K | I | N | R | T | Q | A | E | E | M | L | S | G | K | R | D | G | T | F | L | I | R | E | S | . | S | Q | R | . | G | C | Y | A | C | S | V | V | V | D | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | C | I | M | G | F | I | S | K | E | R | E | R | A | L | L | K | D | Q | Q | P | G | T | F | L | L | R | F | S | E | S | S | R | E | G | A | I | T | F | T | W | V | E | R | S
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  | S |  |  |  |  |  |  |  |  | S | S |  | S | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 577 | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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