Return to main results Retrieve Phyre Job Id

Job DescriptionA1A4Y4
Confidence98.82%DateWed Jun 6 09:17:58 BST 2012
Rank190Aligned Residues125
% Identity12%Templated1kmqa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.........80.........90.........100.........110..
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  PVNITMAGDSGNGMSTFISALRNTGHEGKASPPTELVKATQRCASYFSSHFSNVVLWDLPGTGSATTTLENYLMEMQFNR
Query Conservation     
 
 
    








 
               

               
 
 

                   
Alig confidence 






























...






































..




Template Conservation    





   






 
     
     ... 
                                     ..     
Template Sequence  RKKLVIVGDGACGKTCLLIVNSKDQFPEVYV. . . PTVFENYVADIEVDGKQVELALWDTAGLEDYDRLRPLSY. . PDTDV
Template Known Secondary structure  STTSSS


SS

...

STT

SGGGTTTGGGG
..TT
S
Template Predicted Secondary structure 













...




























..



Template SS confidence 















































































   5....10.........20.........30..... ....40.........50.........60.........70.... .....
 
   113......120.........130...... ...140.........150.........160..
Predicted Secondary structure 





....












Query SS confidence 























. . . .

























Query Sequence  YDFIMVASAQFSMNHVMLAKTAED. . . . MGKKFYIVWTKLDMDLSTGALPEVQL
Query Conservation     
                    ....   
 


 

 
         
  
Alig confidence 























....

























Template Conservation                                        
 
             
Template Sequence  ILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAK
Template Known Secondary structure  TT
TSTTS

GGGTT
Template Predicted Secondary structure 




























Template SS confidence 





















































   80.........90.........100.........110.........120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions