Job Description A1A4Y4 Confidence 99.77% Date Wed Jun 6 09:17:58 BST 2012 Rank 35 Aligned Residues 135 % Identity 21% Template c3t5dC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:septin-7; PDBTitle: crystal structure of septin 7 in complex with gdp Resolution 3.30 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.															.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	N	I	T	M	A	G	D	S	G	N	G	M	S	T	F	I	S	A	L	R	N	T	G	H	E	G	K	A	S	P	P	T	E	L	V	K	A	T	Q	R	C	A	S	Y	F	S	S	H	F	S	N	V	V	L	W	D	L	P	G	T	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.
Template Sequence		E	F	T	L	M	V	V	G	E	S	G	L	G	K	S	T	L	I	N	S	L	F	L	T	D	L	I	K	K	T	V	.	.	.	.	.	.	.	Q	V	E	Q	S	K	V	L	I	K	E	V	Q	L	L	L	T	I	V	D	T	P	G	F	G	D	A	V	D	N	S	N	C	W	Q	P	V	I	D	Y	I	D
Template Known Secondary structure											T	T	S	S									S	S	S					S			.	.	.	.	.	.	.																									S			S			T	T	T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.								.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		99	100	.	.	.	.	.	.	.	.												.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		T	T	L	E	N	Y	L	M	E	M	.	.	.	.	.	.	.	.	.	.	.	Q	F	N	R	Y	D	F	I	M	V	.	A	S	A	Q	F	S	M	N	H	V	M	L	A	K	T	A	E	D	M	G	K	K	F	Y	I	V	W	T	K	L	D	M	D	L	S	T	G	A	L	P	E	V	Q	L	L	Q	I	R
Query Conservation												.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.											.																	.																	.	.	.	.	.	.
Template Conservation																																																		.																	.	.	.	.	.	.
Template Sequence		S	K	F	E	D	Y	L	N	A	E	S	R	V	N	R	R	Q	M	P	D	N	R	V	Q	C	C	L	Y	F	I	A	P	S	G	H	G	L	K	P	L	D	I	E	F	M	K	R	L	.	H	E	K	V	N	I	I	P	L	I	A	K	A	D	T	L	.	.	.	.	.	.	T	P	E	E	C	Q	Q	F	K
Template Known Secondary structure													S	S				S															S			S	S													.	T	T	T	S							S	S	G	G	G	S	.	.	.	.	.	.
Template Predicted Secondary structure																																																		.																	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180							.	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	V	L	E	N	L	Q	K	E	R	V	C	E	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	I	M	K	E	I	Q	E	H	K	I	K	I	Y
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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