Job Description A1A4Y4 Confidence 99.59% Date Wed Jun 6 09:17:58 BST 2012 Rank 76 Aligned Residues 148 % Identity 20% Template c3t35A_ PDB info PDB header:motor protein Chain: A: PDB Molecule:dynamin-related protein 1a, linker, dynamin-related protein PDBTitle: arabidopsis thaliana dynamin-related protein 1a in postfission state Resolution 3.59 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.													.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	P	E	V	I	S	N	I	K	E	T	L	K	I	V	S	R	T	P	V	.	.	.	.	.	.	.	.	.	.	.	.	N	I	T	M	A	G	D	S	G	N	G	M	S	T	F	I	S	A	L	R	N	T	G	H	E	G	K	A	S	P	P	T	E	L	V	K	A	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	L	I	S	L	V	N	K	I	Q	R	A	C	T	A	L	G	D	H	G	D	S	S	A	L	P	T	L	W	D	S	L	P	A	I	A	V	V	G	G	Q	S	S	G	K	S	S	V	L	E	S	I	V	G	K	D	F	L	P	R	G	S	G	I	V	T	R	R	P	L	V	L	Q	L	Q	K	I	D	D	G
Template Known Secondary structure			T							T	T	T	T	T	T	T	S	T	T	S			S	S	S	S	S	S	T	T	T	T										T	T	S	S					T	T	T	T	T	T	S			S				S	S					S											S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
																																											72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.													.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	R	C	A	S	Y	F	S	S	H	F	S	N	V	V	L	W	D	L	P	G	T	G	S	A	.	.	.	.	.	.	.	.	.	.	.	.	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	E	Y	A	E	F	L	H	L	P	R	K	K	F	T	D	F	A	A	V	R	K	E	I	Q	D	E	T	D	R	E	T	G	R	S	K	A	I	S	S	V	P	I	H	L	S	I	Y	S	P	N	V	V	N	L	T	L	I	D	L	P	G	L	T	K	V	A	V	D	G	Q	S	D	S	I	V	K	D	I
Template Known Secondary structure						B			S	S	S	T	T			B														G	G	G	T	S		S	S												B			T	T	S													S	S			S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		T	T	L	E	N	Y	L	M	E	M	Q	F	N	R	Y	D	F	I	M	V	A	S	A	Q	F	S	M	N	H	V	M	L	A	.	K	T	A	E	D	M	G	K	K	F	Y	I	V	W	T	K	L	D	M	D	L	S	T	G	A	L	P	E	V	Q
Query Conservation																																			.
Alig confidence																																			.
Template Conservation
Template Sequence		E	N	M	V	R	S	Y	I	E	K	P	N	C	I	I	L	A	I	S	P	A	N	Q	D	L	A	T	S	D	A	I	K	I	S	R	E	V	D	P	S	G	D	R	T	F	G	V	L	T	K	I	D	L	M	D	K	G	T	D	A	V	E	I	L
Template Known Secondary structure									S	S	S	T	T	S								S	S	S		S	T	T								T	T	S		T	T		S	S									T	T	S		S	S			S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions