Job Description A1A4Y4 Confidence 98.44% Date Wed Jun 6 09:17:58 BST 2012 Rank 261 Aligned Residues 112 % Identity 12% Template c3l82B_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:f-box only protein 4; PDBTitle: x-ray crystal structure of trf1 and fbx4 complex Resolution 2.40 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.								.	100	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.
Query Sequence		R	T	P	V	N	I	T	M	A	G	D	S	G	N	G	M	S	T	F	I	S	A	L	R	N	T	G	H	E	G	K	A	S	P	P	T	E	L	V	K	A	T	Q	R	C	A	S	Y	F	S	S	H	F	S	N	V	V	L	W	D	L	P	G	T	G	S	A	T	.	.	.	.	.	.	.	T	T	L	E	N
Query Conservation																																																																						.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.																									.											.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.																									.
Template Sequence		Q	N	E	P	R	F	A	X	F	G	P	G	L	E	E	L	N	T	S	L	V	L	S	L	X	.	.	.	.	.	.	.	.	S	S	E	E	L	C	P	T	A	G	L	P	Q	R	Q	I	D	G	I	G	S	G	V	N	.	F	Q	L	N	N	Q	H	K	F	N	I	L	I	L	Y	S	T	P	Q	I	Q	K
Template Known Secondary structure												G	G	G	T	S	S	S	S								.	.	.	.	.	.	.	.	T			S	S							G	G	G			T	T	S						.			S	S	S	S									S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.																									.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.									.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.							.	140	.	.	.	.	.	.		.	.	.	150	.	.	.
Predicted Secondary structure																					.	.																	.	.	.	.	.	.									.
Query SS confidence																					.	.																	.	.	.	.	.	.									.
Query Sequence		Y	L	M	E	M	Q	F	N	R	Y	D	F	I	M	V	A	S	A	Q	.	.	F	S	M	N	H	V	M	L	A	K	T	A	E	D	M	G	.	.	.	.	.	.	K	K	F	Y	I	V	W	T	.	K	L	D	M	D	L	S
Query Conservation																					.	.																	.	.	.	.	.	.									.
Alig confidence				.	.																.	.																	.	.	.	.	.	.									.
Template Conservation				.	.
Template Sequence		V	C	.	.	E	V	V	D	G	F	I	Y	V	A	N	A	E	A	H	K	R	H	E	W	Q	D	E	F	S	H	I	X	A	X	T	D	P	A	F	G	S	S	G	R	P	L	L	V	L	S	C	I	S	Q	G	D	V	K	R
Template Known Secondary structure				.	.				S									B	T	T																S		T	T	S	S		S		S									S	S	T	T	S		B
Template Predicted Secondary structure				.	.
Template SS confidence
		282	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions