Job Description A1A4Y4 Confidence 97.92% Date Wed Jun 6 09:17:58 BST 2012 Rank 296 Aligned Residues 132 % Identity 9% Template c3l2oB_ PDB info PDB header:protein binding/cell cycle Chain: B: PDB Molecule:f-box only protein 4; PDBTitle: structure-based mechanism of dimerization-dependent ubiquitination by2 the scffbx4 ubiquitin ligase Resolution 2.80 Å

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		31	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure														.												.																																	.	.	.
Query SS confidence														.												.																																	.	.	.
Query Sequence		R	T	P	V	N	I	T	M	A	G	D	S	.	G	N	G	M	S	T	F	I	S	A	L	.	R	N	T	G	H	E	G	K	A	S	P	P	T	E	L	V	K	A	T	Q	R	C	A	S	Y	F	S	S	H	F	S	N	.	.	.	V	V	L	W	D	L	P	G	T	G	S	A	T	T	T	L	E	N	Y	L
Query Conservation														.												.																																	.	.	.
Alig confidence														.												.																																	.	.	.
Template Conservation
Template Sequence		Q	N	E	P	R	F	A	M	F	G	P	G	L	E	E	L	N	T	S	L	V	L	S	L	M	S	S	E	E	L	C	P	T	A	G	L	P	Q	R	Q	I	D	G	I	G	S	G	V	N	F	Q	L	N	N	Q	H	K	F	N	I	L	I	L	Y	S	T	T	R	R	Y	S	V	I	P	Q	I	Q	K	V	C
Template Known Secondary structure												T					S	S	S							T	T		G	G	G							S	T	T	T		S	S	S									T	T	T									S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.									.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.											.
Query SS confidence																																	.	.	.	.	.	.	.	.											.
Query Sequence		M	E	M	Q	F	N	R	Y	D	F	I	M	V	A	S	A	Q	F	S	M	N	H	V	M	L	A	K	T	A	E	D	.	.	.	.	.	.	.	.	M	G	K	K	F	Y	I	V	W	T	.	K	L	D	M	D	L	S	T	G	A	L	P	E	V	Q	L	L	Q	I	R
Query Conservation																																	.	.	.	.	.	.	.	.											.
Alig confidence		.	.																														.	.	.	.	.	.	.	.											.				.	.
Template Conservation		.	.																																																				.	.
Template Sequence		.	.	E	V	V	D	G	F	I	Y	V	A	N	A	E	A	H	K	R	H	E	W	Q	D	E	F	S	H	I	M	A	M	T	D	P	A	F	G	S	S	G	R	P	L	L	V	L	S	C	I	S	Q	G	.	.	D	V	K	R	M	P	C	F	Y	L	A	H	E	L	H
Template Known Secondary structure		.	.				S							B		B	T	T																							T	T										S	S	T	.	.	T	S		B										T	T
Template Predicted Secondary structure		.	.																																																				.	.
Template SS confidence
				284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.			.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions