Job Description A1A4Y4 Confidence 99.61% Date Wed Jun 6 09:17:58 BST 2012 Rank 72 Aligned Residues 134 % Identity 15% Template c3agqA_ PDB info PDB header:translation,transferase Chain: A: PDB Molecule:elongation factor ts, elongation factor tu 1, linker, q PDBTitle: structure of viral polymerase form ii Resolution 3.22 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	T	P	V	N	I	T	M	A	G	D	S	G	N	G	M	S	T	F	I	S	A	L	R	N	T	G	H	E	G	K	A	S	P	P	T	E	L	V	K	A	T	Q	R	C	A	S	Y	F	S	S	H	F	S	N	V	V	L	W	D	L	P	G	T	G	S	A	T	T	T	L	E	N	Y	L	M	E	M	Q
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.																																	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.																																	.	.
Template Sequence		T	K	P	H	V	N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	L	A	K	T	Y	G	.	.	.	.	.	.	.	.	.	.	G	T	S	H	V	E	Y	D	T	P	T	R	H	Y	A	H	V	D	C	P	G	H	A	D	Y	V	K	N	M	I	T	G	.	.	A	A	Q
Template Known Secondary structure			S											T	T	S	S												T	T	T	T	S		.	.	.	.	.	.	.	.	.	.										S	S																					T	.	.	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.																																	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.											.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.			.	.	360
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		F	N	R	Y	D	F	I	M	V	A	S	A	Q	F	S	M	N	H	V	M	L	A	K	T	A	E	D	M	G	K	K	.	F	Y	I	V	W	T	K	L	D	M	D	L	S	T	G	A	L	P	E	V	Q	L	L	Q	I	R	E	N	V	L	E	N	L	Q	K	E	R	V	C	E
Query Conservation																																	.
Alig confidence																																	.												.	.	.	.	.
Template Conservation																																													.	.	.	.	.
Template Sequence		M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	Q	V	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	.	.	.	.	.	D	D	E	E	L	L	E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D	F	P	G
Template Known Secondary structure			S								T	T	T		S		G	G	G										T	T		S										T	T		.	.	.	.	.	S		T	T	T												T	G	G	G	T	S		T
Template Predicted Secondary structure																																													.	.	.	.	.
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.						.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions