Job Description A1A4Y4 Confidence 99.08% Date Wed Jun 6 09:17:58 BST 2012 Rank 141 Aligned Residues 125 % Identity 14% Template c2zejA_ PDB info PDB header:transferase Chain: A: PDB Molecule:leucine-rich repeat kinase 2; PDBTitle: structure of the roc domain from the parkinson's disease-associated2 leucine-rich repeat kinase 2 reveals a dimeric gtpase Resolution 2.00 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	T	M	A	G	D	S	G	N	G	M	S	T	F	I	S	A	L	R	N	T	G	H	E	G	K	A	S	P	P	T	E	L	V	K	A	T	Q	R	C	A	S	Y	F	S	S	H	F	S	N	V	V	L	W	D	L	P	G	T	G	S	A	T	T	T	L	E	N	Y	L	M	E	M	Q	F	N	R	Y	D
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	X	I	V	G	N	T	G	S	G	K	T	T	L	L	Q	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	K	T	V	G	I	D	V	K	D	W	P	I	L	V	L	N	V	W	D	F	A	G	R	E	E	F	Y	S	T	H	P	H	F	X	T	Q	R	A	L	Y	L	A	V
Template Known Secondary structure							S		T	T	S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				S																		S						T	T	S							S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1336	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.																		.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		F	I	M	V	A	S	A	Q	F	S	M	N	H	V	M	L	A	K	T	A	E	D	M	G	.	.	K	K	F	Y	I	V	W	T	K	L	D	M	D	L	S	T	G	A	L	P	E	V	Q	L	L	Q	I	R	E	N	V	L	E	N	L	Q	K	E	R	V	C	E	Y
Query Conservation																										.	.
Alig confidence																										.	.														.	.	.	.	.
Template Conservation																																									.	.	.	.	.
Template Sequence		Y	D	L	S	K	G	Q	A	E	V	D	A	X	K	P	W	L	F	N	I	K	A	R	A	S	S	S	P	V	I	L	V	G	T	H	L	D	V	S	.	.	.	.	.	D	E	K	Q	R	K	A	C	X	S	K	I	T	K	E	L	L	N	K	R	G	F	P	A	I
Template Known Secondary structure				G	G	G							T													T	T										G	G	G		.	.	.	.	.																T	T	T		T	T	S
Template Predicted Secondary structure																																									.	.	.	.	.
Template SS confidence
		1419	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.						.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions