Job Description A1A4Y4 Confidence 97.66% Date Wed Jun 6 09:17:58 BST 2012 Rank 302 Aligned Residues 103 % Identity 20% Template c2xtzB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:guanine nucleotide-binding protein alpha-1 subunit; PDBTitle: crystal structure of the g alpha protein atgpa1 from2 arabidopsis thaliana Resolution 2.34 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	T	M	A	G	D	S	G	N	G	M	S	T	F	I	S	A	L	R	N	T	G	H	E	G	K	A	S	P	P	T	E	L	V	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.
Template Sequence		K	L	L	L	L	G	A	G	E	S	G	K	S	T	I	F	K	Q	I	K	.	.	.	.	.	.	.	.	.	L	L	F	Q	T	G	F	D	E	G	E	L	K	S	Y	V	P	V	I	H	A	N	V	Y	Q	T	I	K	L	L	H	D	G	T	K	E	F	P	R	L	T	K	D	I	A	E	G	I	E	T	L
Template Known Secondary structure								S	T	T	S	S										.	.	.	.	.	.	.	.	.				S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.										60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
																																										72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	R	C	A	S	Y	F	S	S	H	F	S	N	V	V	L	W	D	L	P	G	T	G	S	A	T	T	T	L	E	N	Y	L	M	E	M	Q	F	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																						.	.
Template Conservation																																																						.																						.	.
Template Sequence		W	K	D	P	A	I	Q	E	T	P	D	T	K	Y	L	M	E	N	L	K	R	L	S	D	I	N	Y	I	P	T	K	E	D	V	L	Y	A	R	V	R	T	T	G	V	V	E	I	Q	F	S	P	E	.	V	Y	R	L	F	D	V	G	G	Q	R	N	E	R	R	K	W	I	H	L	F	.	.	E	G	V	T
Template Known Secondary structure																			T							T	T																	S										.										S	G	G	G	G	G	G	T	G	G	G		.	.	T	T
Template Predicted Secondary structure																																																						.																						.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.
		112	.	.	.	.	.	.	.	120	.												.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query Sequence		R	Y	D	F	I	M	V	A	S	A	.	.	.	.	.	.	.	.	.	.	.	Q	F	S	M	N	H	V	M	L	A	K	T	A	E	D	.	.	.	.	M	G	K	K	F	Y	I	V	W	T	K	L	D
Query Conservation												.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		A	V	I	F	C	A	A	I	S	E	Y	D	Q	T	L	F	E	D	E	Q	K	N	R	M	M	E	T	K	E	L	F	D	W	V	L	K	Q	P	C	F	E	K	T	S	F	M	L	F	L	N	K	F	D
Template Known Secondary structure									G	G	G	T	T		B		S	S		T	T	S	B														T		G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions