Job Description A1A4Y4 Confidence 99.46% Date Wed Jun 6 09:17:58 BST 2012 Rank 90 Aligned Residues 150 % Identity 15% Template c2wwwB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:methylmalonic aciduria type a protein, PDBTitle: crystal structure of methylmalonic acidemia type a protein Resolution 2.64 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.																										.	.
Query SS confidence																																		.	.																										.	.
Query Sequence		E	A	M	N	V	E	K	A	S	A	D	G	N	L	P	E	V	I	S	N	I	K	E	T	L	K	I	V	S	R	T	P	.	.	V	N	I	T	M	A	G	D	S	G	N	G	M	S	T	F	I	S	A	L	R	N	T	G	H	.	.	E	G	K	A	S	P	P	T	E	L	V	K	A	T	Q	R	C	A	S
Query Conservation																																		.	.																										.	.
Alig confidence																																		.	.																										.	.
Template Conservation
Template Sequence		S	T	H	S	R	K	K	E	L	A	Q	V	L	L	Q	K	V	L	L	Y	H	R	E	Q	E	Q	S	N	K	G	K	P	L	A	F	R	V	G	L	S	G	P	P	G	A	G	K	S	T	F	I	E	Y	F	G	K	M	L	T	E	R	G	H	K	L	S	V	L	A	V	D	T	E	L	S	R	D	M	N	A
Template Known Secondary structure				S																								T	T	T	T			S	S									T	T	S	S															T	T												S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure										.	.	.																	.	.	.
Query SS confidence										.	.	.																	.	.	.
Query Sequence		Y	F	S	S	H	F	S	N	.	.	.	V	V	L	W	D	L	P	G	T	G	S	A	T	T	T	L	.	.	.	E	N	Y	L	M	E	M	Q	F	N	R	Y	D	F	I	M	V	A	S	A	Q	F	S	M	N	H	V	M	L	A	K	T	A	E	D	M	G	K	K	F	Y	I	V	W	T	K	L	D	M	D
Query Conservation										.	.	.																	.	.	.
Alig confidence										.	.	.																	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		Y	I	R	P	T	R	T	T	N	E	A	I	L	L	C	E	G	A	G	Y	D	I	I	L	I	E	T	V	G	Q	S	E	F	A	V	A	D	M	V	D	M	F	V	L	L	L	P	P	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	M	A	D	L	V	A	V	T	K	S	D	.	.
Template Known Secondary structure							T	T											T	T		S																T	T	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		S								S	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.																	.	.	.	.	260	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	T	G	A	L	P	E	V	Q	L	L	Q	I	R	E	N	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	L	I	V	P	A	R	R	I	Q	A	E	Y	V	S	A	L
Template Known Secondary structure		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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