Job Description A1A4Y4 Confidence 99.25% Date Wed Jun 6 09:17:58 BST 2012 Rank 122 Aligned Residues 119 % Identity 13% Template c2rexD_ PDB info PDB header:signaling protein/lipoprotein Chain: D: PDB Molecule:rho-related gtp-binding protein rho6; PDBTitle: crystal structure of the effector domain of plxnb1 bound with rnd12 gtpase Resolution 2.30 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	V	S	R	T	P	V	N	I	T	M	A	G	D	S	G	N	G	M	S	T	F	I	S	A	L	R	N	T	G	H	E	G	K	A	S	P	P	T	E	L	V	K	A	T	Q	R	C	A	S	Y	F	S	S	H	F	S	N	V	V	L	W	D	L	P	G	T	G	S	A	T	T	T	L	E	N	Y	L	M
Query Conservation
Alig confidence																																		.	.	.	.	.
Template Conservation																																		.	.	.	.	.
Template Sequence		P	Q	P	V	V	A	R	C	K	L	V	L	V	G	D	V	Q	C	G	K	T	A	M	L	Q	V	L	A	K	D	C	Y	.	.	.	.	.	P	E	T	Y	V	P	T	V	F	E	N	Y	T	A	C	L	E	T	E	E	Q	R	V	E	L	S	L	W	D	T	S	G	S	P	Y	Y	D	N	V	R	P	L	C
Template Known Secondary structure					S											S	T	T	S	S											S			.	.	.	.	.			S					S											S	S													S	G	G	G	T	T	T	G	G	G	G
Template Predicted Secondary structure																																		.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		E	M	Q	F	N	R	Y	D	F	I	M	V	A	S	A	Q	F	S	M	N	H	V	M	L	A	K	T	A	E	D	M	G	K	.	.	K	F	Y	I	V	W	T	K	L	D	M
Query Conservation																																			.	.
Alig confidence																																			.	.
Template Conservation
Template Sequence		Y	S	D	S	D	A	V	L	L	C	F	D	I	S	R	P	E	T	V	A	L	K	K	W	R	T	E	I	L	D	Y	C	P	S	T	R	V	L	L	I	G	C	K	T	D	L
Template Known Secondary structure		G	T	T		S								T	T		T	T	T															T	T	S									G	G	G
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions