Job Description A1A4Y4 Confidence 99.64% Date Wed Jun 6 09:17:58 BST 2012 Rank 70 Aligned Residues 145 % Identity 14% Template c2q3fB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:ras-related gtp-binding protein d; PDBTitle: x-ray crystal structure of putative human ras-related gtp2 binding d in complex with gmppnp Resolution 2.10 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		P	V	N	I	T	M	A	G	D	S	G	N	G	M	S	T	F	I	S	A	L	R	N	T	G	H	E	G	K	A	S	P	P	T	E	L	V	K	A	T	Q	R	C	A	S	Y	F	S	S	H	F	S	N	V	V	L	W	D	L	P	G	T	G	S	A	.	T	T	T	L	E	N	Y	L	M	E	M	Q	F	N
Query Conservation																																																																			.
Alig confidence																												.	.																																						.
Template Conservation																												.	.
Template Sequence		K	P	R	I	L	L	X	G	L	R	R	S	G	K	S	S	I	Q	K	V	V	F	H	K	X	S	.	.	P	N	E	T	L	F	L	E	S	T	N	K	I	C	R	E	D	V	S	N	S	S	F	V	N	F	Q	I	W	D	F	P	G	Q	I	D	F	F	D	P	T	F	D	Y	E	X	I	F	R	G	T	G
Template Known Secondary structure										S	T	T	S	S										S				.	.	G	G	G	G	G	G						S									S	S											S				T	T		T	T									T
Template Predicted Secondary structure																												.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		R	Y	D	F	I	M	V	A	S	A	Q	F	S	M	N	H	V	M	L	A	K	T	A	E	D	.	.	.	.	.	M	G	K	K	F	Y	I	V	W	T	K	L	D	M	D	L	S	T	G	A	L	P	E	V	Q	L	L	Q	I	R	E	N	V	L	E	N	L	Q	K	E	R	V	C	E	Y
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.														.	.
Template Conservation																																													.	.
Template Sequence		A	L	I	F	V	I	D	S	Q	D	D	Y	X	E	A	L	A	R	L	H	L	T	V	T	R	A	Y	K	V	N	T	D	I	N	F	E	V	F	I	H	K	V	D	.	.	G	L	S	D	D	H	K	I	E	T	Q	R	D	I	H	Q	R	A	N	D	D	L	A	D	A	G	L	E	K	I
Template Known Secondary structure									T	T	S																					T	T										T	T	.	.	S	S																							T	T		T	T	S
Template Predicted Secondary structure																																													.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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