Job Description A1A4Y4 Confidence 98.39% Date Wed Jun 6 09:17:58 BST 2012 Rank 263 Aligned Residues 118 % Identity 13% Template c2efhD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:small gtp-binding protein-like; PDBTitle: ara7-gdp/atvps9a(d185n) Resolution 2.10 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	N	I	T	M	A	G	D	S	G	N	G	M	S	T	F	I	S	A	L	R	N	T	G	H	E	G	K	A	S	P	P	T	E	L	V	K	A	T	Q	R	C	A	S	Y	F	S	S	H	F	S	N	V	V	L	W	D	L	P	G	T	G	S	A	T	T	T	L	E	N	Y	L	M	E	M	Q	F	N	R
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	K	L	V	L	L	G	D	V	G	A	G	K	S	S	L	V	L	R	F	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	F	S	Q	T	L	A	V	N	D	A	T	V	K	F	E	I	W	D	T	A	G	Q	E	R	Y	H	S	L	A	P	M	Y	Y	R	G	A	A	A
Template Known Secondary structure											T	T	S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T													S	G	G	G	G	G	G						T	T		S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.																		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		Y	D	F	I	M	V	A	S	A	Q	F	S	M	N	H	V	M	L	A	K	T	A	E	D	.	.	.	.	M	G	K	K	F	Y	I	V	W	T	K	L	D	M	D	L	S	T	G	A	L	P	E	V	Q	L	L	Q	I	R	E
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.
Template Conservation
Template Sequence		A	I	I	V	F	D	V	T	N	Q	A	S	F	E	R	A	K	K	W	V	Q	E	L	Q	A	Q	G	N	P	N	M	V	M	A	L	A	G	N	K	S	D	L	L	D	A	R	K	V	T	A	E	D	A	Q	T	Y	A	Q	E
Template Known Secondary structure								T	T																			S		T	T										T	T			T	T			S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions