Job Description A1A4Y4 Confidence 98.97% Date Wed Jun 6 09:17:58 BST 2012 Rank 155 Aligned Residues 147 % Identity 12% Template c2b92A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:interferon-induced guanylate-binding protein 1; PDBTitle: crystal-structure of the n-terminal large gtpase domain of human2 guanylate binding protein 1 (hgbp1) in complex with gdp/alf3 Resolution 3.20 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																									.																								.	.	.	.
Query SS confidence																																									.																								.	.	.	.
Query Sequence		S	N	I	K	E	T	L	K	I	V	S	R	T	P	V	N	I	T	M	A	G	D	S	G	N	G	M	S	T	F	I	S	A	L	R	N	T	G	H	.	E	G	K	A	S	P	P	T	E	L	V	K	A	T	Q	R	C	A	S	Y	F	S	S	.	.	.	.	H	F	S	N	V	V	L	W	D	L	P	G	T
Query Conservation																																									.																								.	.	.	.
Alig confidence																																									.						.	.	.																.	.	.	.
Template Conservation																																															.	.	.
Template Sequence		P	E	A	L	K	I	L	S	A	I	T	Q	P	M	V	V	V	A	I	V	G	L	Y	R	T	G	K	S	Y	L	M	N	K	L	A	G	K	K	K	G	F	S	L	G	S	.	.	.	T	V	Q	S	H	T	K	G	I	W	M	W	C	V	P	H	P	K	K	P	G	H	I	L	V	L	L	D	T	E	G	L
Template Known Secondary structure									T	T			S	B									B	S	S	S	S									T	T		S	S	S	S					.	.	.	S	S	S					S									S	S	S	T	T											B
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		95	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.												.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	.	.	.	.	A	T	T	T	L	E	N	Y	L	M	E	M	Q	F	N	R	Y	D	F	I	M	V	A	S	A	Q	F	S	M	N	H	V	M	L	A	K	T	A	E	D	.	.	.	.	.	.	.	.	.	.	.	M	G	K	K	F	Y	I	V	W	T	K	L	D	M	D	L	S	T	G	A	L	P	E
Query Conservation				.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	V	E	K	G	D	N	Q	N	D	S	W	I	F	A	L	A	V	L	L	S	S	T	F	V	Y	N	S	I	G	T	I	N	Q	Q	A	M	D	Q	L	Y	Y	V	T	E	L	T	H	R	I	R	S	K	S	V	S	F	F	P	D	F	V	W	T	L	R	D	F	S	L	D	L	E	A	D	G	Q	P	L
Template Known Secondary structure		T		T	T	T																		S								S	S																											S									S			S					T	T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	L	L	Q	I	R	E	N	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	D	E	Y	L	T	Y	S	L
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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