292 c1vmaA_ Probab=98.01   E-value=1.7e-05  Score=49.06  Aligned_columns=117  Identities=23%

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEC----------------------------
Q ss_conf             0046179999308986999999984876344454677988554044446703----------------------------
Q batch____        30 SRTPVNITMAGDSGNGMSTFISALRNTGHEGKASPPTELVKATQRCASYFSS----------------------------   81 (181)
Q Consensus        30 ~~~~~~I~v~G~~~~GKSSliNaL~g~~~~~~~~~~~~~~~tt~~~~~~~~~----------------------------   81 (181)
                      ...+..|+++|.+|+||||.+-.|...- ...+..+.-+..-|..+......                            
T Consensus        89 ~~~~~vi~~~Gp~G~GKTTt~aklA~~~-~~~g~~v~li~~D~~R~gA~eQL~~~a~~~~v~~~~~~~~~~~~~~~~~~~  167 (294)
T c1vmaA_          89 PEPPFVIMVVGVNGTGKTTSCGKLAKMF-VDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPAAVAFDAV  167 (294)
T ss_dssp             SSSCEEEEEECCTTSSHHHHHHHHHHHH-HHTTCCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCSTTCCHHHHHHHHH
T ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHH-HHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHH
T ss_conf             7896699998068876024899999999-967994899975876864799999999761982897488369899999999


Q ss_pred             -----CCCEEEEEECCCCCCHHHHHHHHHHHHC----------CCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             -----8970588406874203467999999702----------5879996103776786799999999972995999985
Q batch____        82 -----HFSNVVLWDLPGTGSATTTLENYLMEMQ----------FNRYDFIMVASAQFSMNHVMLAKTAEDMGKKFYIVWT  146 (181)
Q Consensus        82 -----~~~~~~l~D~pg~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~iiV~n  146 (181)
                           ....+.++||+|-..........+....          .+..++|+++..+  ..+...+....+.-.+--+++|
T Consensus       168 ~~~~~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~--~~~~~~~~~~~~~~~~~~iIlT  245 (294)
T c1vmaA_         168 AHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTG--QNGLVQAKIFKEAVNVTGIILT  245 (294)
T ss_dssp             HHHHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGH--HHHHHHHHHHHHHSCCCEEEEE
T ss_pred             HHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC--HHHHHHHHHHHHCCCCCEEEEE
T ss_conf             99997799899981888987857999999999999630356688539998114687--8999999999630899769997


Q ss_pred             CCC
Q ss_conf             644
Q batch____       147 KLD  149 (181)
Q Consensus       147 K~D  149 (181)
                      |+|
T Consensus       246 KlD  248 (294)
T c1vmaA_         246 KLD  248 (294)
T ss_dssp             CGG
T ss_pred             CCC
T ss_conf             444


