Job Description A1A4Y4 Confidence 99.71% Date Wed Jun 6 09:17:58 BST 2012 Rank 56 Aligned Residues 141 % Identity 18% Template c1skqB_ PDB info PDB header:translation Chain: B: PDB Molecule:elongation factor 1-alpha; PDBTitle: the crystal structure of sulfolobus solfataricus elongation2 factor 1-alpha in complex with magnesium and gdp Resolution 1.80 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.																	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	N	I	T	M	A	G	D	S	G	N	G	M	S	T	F	I	S	A	L	R	N	T	G	H	E	G	K	A	S	P	P	T	E	L	V	K	A	T	Q	R	C	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	F	S	S	H	F	S	N	V	V	L	W	D	L	P	G	T	G	S	A
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	N	L	I	V	I	G	H	V	D	H	G	K	S	T	L	V	G	R	L	L	M	D	R	G	F	I	D	E	K	T	V	K	E	A	E	E	A	A	K	K	L	G	K	E	S	E	K	F	A	F	L	L	D	R	L	K	E	E	M	R	F	E	T	K	K	Y	F	F	T	I	I	D	A	P	G	H	R	D	F
Template Known Secondary structure									S	T	T	S	S													B				S	S												T	T		T	T												T							S	S									T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.								.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.																		.
Query SS confidence																											.	.	.	.	.	.	.																		.
Query Sequence		T	T	T	L	E	N	Y	L	M	E	M	Q	F	N	R	Y	D	F	I	M	V	A	S	A	Q	.	.	.	.	.	.	.	F	S	M	N	H	V	M	L	A	K	T	A	E	D	M	G	K	.	K	F	Y	I	V	W	T	K	L	D	M	D	L	S	T	G	A	L	P	E	V	Q	L	L	Q	I	R	E	N	V
Query Conservation																											.	.	.	.	.	.	.																		.
Alig confidence										.	.																.	.	.	.	.	.	.																		.											.	.
Template Conservation										.	.																																																			.	.
Template Sequence		V	K	N	M	I	T	G	A	.	.	S	Q	A	D	A	A	I	L	V	V	S	A	K	K	G	E	Y	E	A	G	M	S	V	E	G	Q	T	R	E	H	I	I	L	A	K	T	M	G	L	D	Q	L	I	V	A	V	N	K	M	D	.	.	L	T	E	P	P	Y	D	E	K	R	Y	K	E	I	V	D	Q	V
Template Known Secondary structure								S	S	.	.	S			S									S	T	T						S	S	S	S													T	T											G	G	.	.	G	S	S	S	T	T
Template Predicted Secondary structure										.	.																																																			.	.
Template SS confidence
		98	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	N	L	Q	K	E	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	F	M	R	S	Y	G	F
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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