Phyre 2 alignment of A1A4Y4 with c3qf4A_

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Job Description | A1A4Y4
Confidence | 96.58% | Date | Wed Jun 6 09:17:58 BST 2012
Rank | 432 | Aligned Residues | 28
% Identity | 18% | Template | c3qf4A_
PDB info | PDB header:transport protein | Chain: A: PDB Molecule:abc transporter, atp-binding protein; | PDBTitle: crystal structure of a heterodimeric abc transporter in its inward-2 facing conformation
Resolution | 2.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | N | I | T | M | A | G | D | S | G | N | G | M | S | T | F | I | S | A | L | R | N | T | G | H | E | G | K | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | V | A | V | L | G | E | T | G | S | G | K | S | T | L | M | N | L | I | P | R | L | I | D | P | E | R | G
Template Known Secondary structure |  |  |  |  |  |  |  | S | S | S | S | S |  |  |  |  |  |  | T | T | T | T | S | S |  |  | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 361 | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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