Return to main results Retrieve Phyre Job Id

Job DescriptionA0PJE2
Confidence99.97%DateWed May 9 17:33:15 BST 2012
Rank30Aligned Residues257
% Identity13%Templated1bdba_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.........90.........100.........110......
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  QIPGRVFLVTGGNSGIGKATALEIAKRGGTVHLVCRDQAPAEDARGEIIRESGNQNIFLHIVDLSDPKQIWKFVENFKQE
Query Conservation   
 













 
 
  

  

 


  
                                            
Alig confidence 















































































Template Conservation   
 









 


 
 
  
   

 

   
    
                                       
Template Sequence  KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKID
Template Known Secondary structure  TTTT
TTTSTT
S
GGG

TT
S


Template Predicted Secondary structure 





























Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   117..120.........130.........140.........150.........160.........170.........180.........190......
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  HKLHVLINNAGCMVNKRELTEDGLEKNFAANTLGVYILTTGLIPVLEKEHDPRVITVSSGGMLVQKLNTNDLQSERTPFD
Query Conservation                                                            
                     
Alig confidence 




































































...........
Template Conservation                                                              
        ...........
Template Sequence  TLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNG. . . . . . . . . . .
Template Known Secondary structure 






TT

GGGS
TTTTT


GGGTSTTS...........
Template Predicted Secondary structure 










































...........
Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150
 
   197..200.........210........ .220.........230.........240.. .......250.........260.........
Predicted Secondary structure 
.








......







Query SS confidence 





















.























. . . . . .


























Query Sequence  GTMVYAQNKRQQVVLTERWAQG. HPAIHFSSMHPGWADTPGVRQAMP. . . . . . GFHARFGDRLRSEAQGADTMLWLALSS
Query Conservation      
  

         
   .   
 
  
 

 
 
 
      ......           
 
 

      
   
Alig confidence 





















.























......























.

Template Conservation        


          
 
    
 

 
 

 
 
                   

 
   




    

 .
 
Template Sequence  GGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGPLADMLKSVLPIGRMPEVEEYTGAYVFFA. TR
Template Known Secondary structure  S
TTT




S




GGG

TTT
TTSS


GGGGS.
Template Predicted Secondary structure 

































.

Template SS confidence 















































































   151........160.........170.........180.........190.........200.........210.........220....... ..
 
   270.........280.........290.........300......
Predicted Secondary structure 



















Query SS confidence 




































Query Sequence  AAAAQPSGRFFQDRKPVSTHLPLATASSSPAEEEKLI
Query Conservation         
 
                         

Alig confidence 



















.















Template Conservation    
  


  
 



    .                
Template Sequence  GDAAPATGALLNYDGGLGVR. GFFSGAGGNDLLEQLN
Template Known Secondary structure  TT
SS
SSSGGG
.
SS
S
S
TTT
Template Predicted Secondary structure 











.







Template SS confidence 




































   239240.........250........ .260.........270....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions