Job Description A0PJE2 Confidence 99.92% Date Wed May 9 17:33:15 BST 2012 Rank 180 Aligned Residues 216 % Identity 18% Template c4e4yA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:short chain dehydrogenase family protein; PDBTitle: the crystal structure of a short chain dehydrogenase family protein2 from francisella tularensis subsp. tularensis schu s4 Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	R	V	F	L	V	T	G	G	N	S	G	I	G	K	A	T	A	L	E	I	A	K	R	G	G	T	V	H	L	V	C	R	D	Q	A	P	A	E	D	A	R	G	E	I	I	R	E	S	G	N	Q	N	I	F	L	H	I	V	D	L	S	D	P	K	Q	I	W	K	F	V	E	N	F	K	Q	E	H	K
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.
Template Sequence		A	X	A	N	Y	L	V	T	G	G	S	K	G	I	G	K	A	V	V	E	L	L	L	Q	N	K	N	H	T	V	I	N	I	D	I	Q	Q	S	F	S	A	.	.	.	.	.	.	.	.	.	.	E	N	L	K	F	I	K	A	D	L	T	K	Q	Q	D	I	T	N	V	L	D	I	I	K	N	V	S	F	D
Template Known Secondary structure										T	T	T	S											T	T	S	T	T								S	S						.	.	.	.	.	.	.	.	.	.	T	T								T	T												T	T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40											.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	V	L	I	N	N	A	G	C	M	V	N	K	R	E	L	T	E	D	G	L	E	K	N	F	A	A	N	T	L	G	V	Y	I	L	T	T	G	L	I	P	V	L	E	K	E	H	D	P	R	V	I	T	V	S	S	G	G	M	L	V	Q	K	L	N	T	N	D	L	Q	S	E	R	T	P	F	D	G	T
Query Conservation
Alig confidence																																														.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	F	L	N	A	G	I	L	I	K	G	S	I	F	D	I	D	I	E	S	I	K	K	V	L	D	L	N	V	W	S	S	I	Y	F	I	K	G	L	E	N	N	L	.	.	K	V	G	A	S	I	V	F	N	G	S	D	Q	C	F	I	A	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S
Template Known Secondary structure													B		T	T	T	S													T										T	G	G	G		.	.												G	G	G	T				T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	B
Template Predicted Secondary structure																																														.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.														.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.																	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																							.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	V	Y	A	Q	N	K	R	Q	Q	V	V	L	T	E	R	W	A	Q	G	H	.	.	P	A	I	H	F	S	S	M	H	P	G	W	A	D	T	P	G	V	R	Q	A	M	P	G	F	H	A	R	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	L	R	S	E	A	Q	G	A	D
Query Conservation																							.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	Y	T	L	S	K	G	A	I	A	Q	X	T	K	S	L	A	L	D	L	A	K	Y	Q	I	R	V	N	T	V	C	P	G	T	V	D	T	D	L	Y	R	N	L	I	Q	K	Y	A	N	N	V	G	I	S	F	D	E	A	Q	K	Q	E	E	K	E	F	P	L	N	R	I	A	Q	P	Q	E	I	A	E
Template Known Secondary structure																							G	G	G	T									S		B																	T												T	T	S	T	T	S	S		B
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M	L	W	L	A	L	S	S	A	A	A	A	Q	P	S	G	R	F	F	Q
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		L	V	I	F	L	L	.	.	S	D	K	S	K	F	X	T	G	G	L	I	P
Template Known Secondary structure								.	.	S	G	G	G	T	T			S
Template Predicted Secondary structure								.	.
Template SS confidence
		215	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions