Job Description A0PJE2 Confidence 99.95% Date Wed May 9 17:33:15 BST 2012 Rank 112 Aligned Residues 216 % Identity 25% Template c4e3zA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase protein; PDBTitle: crystal structure of a oxidoreductase from rhizobium etli cfn 42 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	R	V	F	L	V	T	G	G	N	S	G	I	G	K	A	T	A	L	E	I	A	K	R	G	G	T	V	H	L	V	C	R	D	Q	A	P	A	E	D	A	R	G	E	I	I	R	E	S	G	N	Q	N	I	F	L	H	I	V	D	L	S	D	P	K	Q	I	W	K	F	V	E	N	F	K	Q	E	H	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	P	V	V	L	V	T	G	G	S	R	G	I	G	A	A	V	C	R	L	A	A	R	Q	G	W	R	V	G	V	N	Y	A	A	N	R	E	A	A	D	A	V	V	A	A	I	T	E	S	G	G	E	A	V	A	I	P	G	D	V	G	N	A	A	D	I	A	A	X	F	S	A	V	D	R	Q	F	G	R
Template Known Secondary structure			S						T	T	T	T	S													T	T								S	S															T	T										T	T																	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																														.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.
Query Sequence		L	H	V	L	I	N	N	A	G	C	M	V	N	K	R	E	L	T	E	D	G	L	E	K	N	F	A	A	N	T	L	G	V	Y	I	L	T	T	G	L	I	P	V	L	.	.	.	.	.	.	E	K	E	H	D	P	R	V	I	T	V	S	S	G	G	M	L	V	Q	K	L	N	T	N	D	L	Q	S	E	R
Query Conservation																																														.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		L	D	G	L	V	N	N	A	G	I	V	D	Y	P	Q	R	V	D	E	X	S	V	E	R	I	E	R	X	L	R	V	N	V	T	G	S	I	L	C	A	A	E	A	V	R	R	X	S	R	L	Y	S	G	Q	G	G	A	I	V	N	V	S	S	X	A	A	I	L	G	S	A	T	.	.	.	.	.	.	.	.
Template Known Secondary structure																		G	G	G														T																G	G	G	T												T							T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		T	P	F	D	G	T	M	V	Y	A	Q	N	K	R	Q	Q	V	V	L	T	E	R	W	A	Q	G	H	.	.	P	A	I	H	F	S	S	M	H	P	G	W	A	D	T	P	G	V	R	Q	A	M	P	G	F	H	A	R	F	G	D	R	L	R	S	E	A	Q	G	A	D	T	M	L	W	L	A	L	S	S	A
Query Conservation																													.	.
Alig confidence		.	.	.	.																								.	.																					.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation		.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		.	.	.	.	Q	Y	V	D	Y	A	A	S	K	A	A	I	D	T	F	T	I	G	L	A	R	E	V	A	A	E	G	I	R	V	N	A	V	R	P	G	I	I	E	S	V	P	X	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	A	G	X	P	E	E	V	A	D	A	I	L	Y	L	L	.	.	S	P
Template Known Secondary structure		.	.	.	.	T																							G	G	G	T										S	B				T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.		B														.	.	S	G
Template Predicted Secondary structure		.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
						155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.													200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.
		271	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	Q	P	S	G	R	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	S	Y	V	T	G	S	I	L
Template Known Secondary structure		G	G	T	T			S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions