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Job DescriptionA0PJE2
Confidence99.97%DateWed May 9 17:33:15 BST 2012
Rank54Aligned Residues224
% Identity19%Templatec3vc7B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase from sinorhizobium2 meliloti 1021
Resolution2.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.........90.........100.........110......
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Query Sequence  QIPGRVFLVTGGNSGIGKATALEIAKRGGTVHLVCRDQAPAEDARGEIIRESGNQNIFLHIVDLSDPKQIWKFVENFKQE
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Template Sequence  NYQGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPR. . . . VHALRSDIADLNEIAVLGAAAGQTL
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STT
T
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S
GGG....

TT
T
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   3......10.........20.........30.........40.........50... ......60.........70........
 
   117..120.........130.........140.........150.........160.........170.........180.........190......
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Query Sequence  HKLHVLINNAGCMVNKRELTEDGLEKNFAANTLGVYILTTGLIPVLEKEHDPRVITVSSGGMLVQKLNTNDLQSERTPFD
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Template Sequence  GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHP. . . . . . . . . . . . .
Template Known Secondary structure  SS








GGG

TGGG

GGGSS

T.............
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   7980.........90.........100.........110.........120.........130.........140.....
 
   197..200.........210......... 220.........230.........240.........250.........260.........270....
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Query Sequence  GTMVYAQNKRQQVVLTERWAQGH. . PAIHFSSMHPGWADTPGVRQAMPGFHARFGDRLRSEAQGADTMLWLALSSAAAAQ
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Template Sequence  GXSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTRAEFKTLGDNITPXK. RNGTADEVARAVLFLA. . FE. ATF
Template Known Secondary structure  T
TGGGT

SB


STTS.S
B
..T.
TT
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   146...150.........160.........170.........180.........190.........200 .........210...... .. .220.
 
   275....280.
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Query Sequence  PSGRFFQ
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Template Sequence  TTGAKLA
Template Known Secondary structure 

S
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   234.....240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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