Job Description A0PJE2 Confidence 99.96% Date Wed May 9 17:33:15 BST 2012 Rank 94 Aligned Residues 213 % Identity 23% Template c3tjrA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a rv0851c ortholog short chain dehydrogenase from2 mycobacterium paratuberculosis Resolution 1.60 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	V	Q	I	P	G	R	V	F	L	V	T	G	G	N	S	G	I	G	K	A	T	A	L	E	I	A	K	R	G	G	T	V	H	L	V	C	R	D	Q	A	P	A	E	D	A	R	G	E	I	I	R	E	S	G	N	Q	N	I	F	L	H	I	V	D	L	S	D	P	K	Q	I	W	K	F	V	E	N	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	S	G	F	D	G	R	A	A	V	V	T	G	G	A	S	G	I	G	L	A	T	A	T	E	F	A	R	R	G	A	R	L	V	L	S	D	V	D	Q	P	A	L	E	Q	A	V	N	G	L	R	G	Q	G	F	D	A	H	G	V	V	C	D	V	R	H	L	D	E	M	V	R	L	A	D	E	A	F	R
Template Known Secondary structure						S	T	T							T	T	T	S													T	T								S															T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		K	Q	E	H	K	L	H	V	L	I	N	N	A	G	C	M	V	N	K	R	E	L	T	E	D	G	L	E	K	N	F	A	A	N	T	L	G	V	Y	I	L	T	T	G	L	I	P	V	L	.	.	E	K	E	H	D	P	R	V	I	T	V	S	S	G	G	M	L	V	Q	K	L	N	T	N	D	L	Q	S	E
Query Conservation																																																			.	.
Alig confidence																																																			.	.																						.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		L	L	G	G	V	D	V	V	F	S	N	A	G	I	V	V	A	G	P	L	A	Q	M	N	H	D	D	W	R	W	V	I	D	I	D	L	W	G	S	I	H	A	V	E	A	F	L	P	R	L	L	E	Q	G	T	G	G	H	I	A	F	T	A	S	F	A	G	L	V	P	N	A	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S		S												B		G	G	G														T																			S										G	G	G	T	S			T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		R	T	P	F	D	G	T	M	V	Y	A	Q	N	K	R	Q	Q	V	V	L	T	E	R	W	A	Q	G	.	.	H	P	A	I	H	F	S	S	M	H	P	G	W	A	D	T	P	G	V	R	Q	A	M	P	G	F	H	A	R	F	G	D	R	L	R	S	E	A	Q	G	A	D	T	M	L	W	L	A
Query Conservation																													.	.
Alig confidence		.	.	.	.	.																							.	.																											.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																																			.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	G	L	G	T	Y	G	V	A	K	Y	G	V	V	G	L	A	E	T	L	A	R	E	V	K	P	N	G	I	G	V	S	V	L	C	P	M	V	V	E	T	K	L	V	S	N	S	E	R	I	R	.	.	.	.	.	.	.	S	V	S	A	D	D	V	A	R	L	T	A	D	A	I
Template Known Secondary structure		.	.	.	.	.	T	B																						G	G	G	T									S				S	S										.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.																																																			.	.	.	.	.	.	.
Template SS confidence
							156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.								.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions